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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
76.1
nTPM
Monaco:
130.2
nTPM
Schmiedel:
281.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.1
HPA sample
nTPM
gdT-cell nTPM: 51.4
Samples: 6
Max nTPM: 64.9
Min nTPM: 33.7
P10809_1007
33.7
P10809_1022
64.9
P10809_1041
47.9
P10809_1060
52.4
P10809_1077
59.0
P10809_1098
50.4
MAIT T-cell nTPM: 65.3
Samples: 6
Max nTPM: 89.8
Min nTPM: 35.8
P10809_1006
35.8
P10809_1024
89.8
P10809_1043
63.3
P10809_1062
63.2
P10809_1083
69.4
P10809_1097
70.0
Memory CD4 T-cell nTPM: 58.7
Samples: 6
Max nTPM: 66.1
Min nTPM: 38.3
P10809_1014
38.3
P10809_1026
61.6
P10809_1045
66.1
P10809_1064
60.0
P10809_1086
66.1
P10809_1113
59.8
Memory CD8 T-cell nTPM: 60.3
Samples: 5
Max nTPM: 74.7
Min nTPM: 45.4
P10809_1012
45.4
P10809_1027
64.0
P10809_1046
54.9
P10809_1065
62.6
P10809_1111
74.7
Naive CD4 T-cell nTPM: 63.0
Samples: 6
Max nTPM: 73.9
Min nTPM: 38.8
P10809_1015
38.8
P10809_1030
73.9
P10809_1049
68.4
P10809_1068
69.7
P10809_1085
67.0
P10809_1112
60.4
Naive CD8 T-cell nTPM: 56.1
Samples: 6
Max nTPM: 67.6
Min nTPM: 31.2
P10809_1016
31.2
P10809_1031
67.6
P10809_1050
53.2
P10809_1069
66.4
P10809_1087
65.4
P10809_1110
52.5
T-reg nTPM: 76.1
Samples: 6
Max nTPM: 119.0
Min nTPM: 40.8
P10809_1018
40.8
P10809_1037
72.0
P10809_1056
119.0
P10809_1075
68.6
P10809_1094
76.0
P10809_1106
80.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 105.1
Samples: 4
Max nTPM: 114.0
Min nTPM: 89.1
RHH5202_R3573
104.5
RHH5230_R3602
89.1
RHH5259_R3631
114.0
RHH5288_R3660
112.6
Effector memory CD8 T-cell nTPM: 130.2
Samples: 4
Max nTPM: 138.5
Min nTPM: 122.1
RHH5203_R3574
135.6
RHH5231_R3603
124.7
RHH5260_R3632
138.5
RHH5289_R3661
122.1
MAIT T-cell nTPM: 116.4
Samples: 4
Max nTPM: 130.6
Min nTPM: 84.5
RHH5233_R3605
123.4
RHH5205_R3576
127.2
RHH5262_R3634
130.6
RHH5297_R3663
84.5
Memory CD4 T-cell TFH nTPM: 129.1
Samples: 4
Max nTPM: 149.7
Min nTPM: 95.7
RHH5300_R3666
95.7
RHH5236_R3608
135.9
RHH5265_R3637
134.9
RHH5208_R3579
149.7
Memory CD4 T-cell Th1 nTPM: 106.8
Samples: 4
Max nTPM: 130.0
Min nTPM: 82.6
RHH5210_R3581
103.7
RHH5302_R3668
110.7
RHH5238_R3610
82.6
RHH5267_R3639
130.0
Memory CD4 T-cell Th1/Th17 nTPM: 120.8
Samples: 4
Max nTPM: 148.3
Min nTPM: 92.6
RHH5303_R3669
148.3
RHH5211_R3582
127.2
RHH5239_R3611
92.6
RHH5268_R3640
115.0
Memory CD4 T-cell Th17 nTPM: 121.1
Samples: 4
Max nTPM: 137.6
Min nTPM: 101.7
RHH5304_R3670
127.3
RHH5212_R3583
101.7
RHH5240_R3612
117.7
RHH5269_R3641
137.6
Memory CD4 T-cell Th2 nTPM: 119.3
Samples: 4
Max nTPM: 141.7
Min nTPM: 92.4
RHH5305_R3671
92.4
RHH5213_R3584
141.7
RHH5241_R3613
119.3
RHH5270_R3642
123.6
Naive CD4 T-cell nTPM: 126.4
Samples: 4
Max nTPM: 145.7
Min nTPM: 99.8
RHH5306_R3672
116.3
RHH5214_R3585
145.7
RHH5242_R3614
99.8
RHH5271_R3643
143.8
Naive CD8 T-cell nTPM: 121.0
Samples: 4
Max nTPM: 145.0
Min nTPM: 107.9
RHH5201_R3572
145.0
RHH5229_R3601
111.1
RHH5258_R3630
107.9
RHH5287_R3659
120.1
Non-Vd2 gdTCR nTPM: 127.7
Samples: 4
Max nTPM: 153.2
Min nTPM: 98.4
RHH5235_R3607
124.4
RHH5264_R3636
134.9
RHH5207_R3578
153.2
RHH5299_R3665
98.4
T-reg nTPM: 127.3
Samples: 4
Max nTPM: 144.8
Min nTPM: 108.1
RHH5301_R3667
108.1
RHH5237_R3609
127.4
RHH5266_R3638
128.9
RHH5209_R3580
144.8
Terminal effector memory CD4 T-cell nTPM: 111.9
Samples: 2
Max nTPM: 111.9
Min nTPM: 111.8
RHH5243_R3615
111.9
RHH5272_R3644
111.8
Terminal effector memory CD8 T-cell nTPM: 119.5
Samples: 4
Max nTPM: 137.6
Min nTPM: 109.9
RHH5232_R3604
118.7
RHH5204_R3575
109.9
RHH5261_R3633
137.6
RHH5296_R3662
111.8
Vd2 gdTCR nTPM: 122.9
Samples: 4
Max nTPM: 155.2
Min nTPM: 84.3
RHH5234_R3606
125.8
RHH5206_R3577
126.1
RHH5263_R3635
155.2
RHH5298_R3664
84.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
