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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
703.7
nTPM
Monaco:
427.3
nTPM
Schmiedel:
92.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
703.7
HPA sample
nTPM
gdT-cell nTPM: 392.0
Samples: 6
Max nTPM: 460.3
Min nTPM: 336.3
P10809_1007
336.3
P10809_1022
359.1
P10809_1041
427.7
P10809_1060
356.4
P10809_1077
460.3
P10809_1098
412.0
MAIT T-cell nTPM: 409.7
Samples: 6
Max nTPM: 478.9
Min nTPM: 302.6
P10809_1006
302.6
P10809_1024
478.9
P10809_1043
368.2
P10809_1062
402.5
P10809_1083
431.3
P10809_1097
474.5
Memory CD4 T-cell nTPM: 488.3
Samples: 6
Max nTPM: 545.8
Min nTPM: 450.9
P10809_1014
450.9
P10809_1026
477.5
P10809_1045
460.1
P10809_1064
503.4
P10809_1086
545.8
P10809_1113
492.2
Memory CD8 T-cell nTPM: 456.8
Samples: 5
Max nTPM: 500.8
Min nTPM: 373.5
P10809_1012
373.5
P10809_1027
494.1
P10809_1046
437.2
P10809_1065
478.5
P10809_1111
500.8
Naive CD4 T-cell nTPM: 445.3
Samples: 6
Max nTPM: 483.6
Min nTPM: 399.3
P10809_1015
451.3
P10809_1030
483.6
P10809_1049
399.3
P10809_1068
453.7
P10809_1085
436.0
P10809_1112
447.6
Naive CD8 T-cell nTPM: 438.5
Samples: 6
Max nTPM: 498.9
Min nTPM: 406.7
P10809_1016
406.7
P10809_1031
455.5
P10809_1050
409.2
P10809_1069
445.4
P10809_1087
498.9
P10809_1110
415.5
T-reg nTPM: 703.7
Samples: 6
Max nTPM: 825.0
Min nTPM: 588.8
P10809_1018
588.8
P10809_1037
727.8
P10809_1056
629.5
P10809_1075
722.4
P10809_1094
728.9
P10809_1106
825.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
427.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 318.6
Samples: 4
Max nTPM: 488.2
Min nTPM: 226.0
RHH5202_R3573
326.6
RHH5230_R3602
233.6
RHH5259_R3631
226.0
RHH5288_R3660
488.2
Effector memory CD8 T-cell nTPM: 267.3
Samples: 4
Max nTPM: 357.8
Min nTPM: 183.7
RHH5203_R3574
357.8
RHH5231_R3603
339.6
RHH5260_R3632
183.7
RHH5289_R3661
188.1
MAIT T-cell nTPM: 289.2
Samples: 4
Max nTPM: 406.0
Min nTPM: 193.1
RHH5233_R3605
296.6
RHH5205_R3576
193.1
RHH5262_R3634
261.1
RHH5297_R3663
406.0
Memory CD4 T-cell TFH nTPM: 360.6
Samples: 4
Max nTPM: 421.6
Min nTPM: 301.7
RHH5300_R3666
369.0
RHH5236_R3608
421.6
RHH5265_R3637
301.7
RHH5208_R3579
349.9
Memory CD4 T-cell Th1 nTPM: 341.1
Samples: 4
Max nTPM: 485.7
Min nTPM: 238.4
RHH5210_R3581
361.8
RHH5302_R3668
485.7
RHH5238_R3610
238.4
RHH5267_R3639
278.5
Memory CD4 T-cell Th1/Th17 nTPM: 327.6
Samples: 4
Max nTPM: 452.6
Min nTPM: 161.7
RHH5303_R3669
425.2
RHH5211_R3582
452.6
RHH5239_R3611
161.7
RHH5268_R3640
270.7
Memory CD4 T-cell Th17 nTPM: 257.3
Samples: 4
Max nTPM: 399.2
Min nTPM: 187.5
RHH5304_R3670
237.0
RHH5212_R3583
399.2
RHH5240_R3612
205.3
RHH5269_R3641
187.5
Memory CD4 T-cell Th2 nTPM: 355.6
Samples: 4
Max nTPM: 491.4
Min nTPM: 234.3
RHH5305_R3671
387.1
RHH5213_R3584
309.6
RHH5241_R3613
491.4
RHH5270_R3642
234.3
Naive CD4 T-cell nTPM: 294.8
Samples: 4
Max nTPM: 358.3
Min nTPM: 212.8
RHH5306_R3672
309.9
RHH5214_R3585
358.3
RHH5242_R3614
298.0
RHH5271_R3643
212.8
Naive CD8 T-cell nTPM: 289.0
Samples: 4
Max nTPM: 385.9
Min nTPM: 176.8
RHH5201_R3572
331.2
RHH5229_R3601
176.8
RHH5258_R3630
385.9
RHH5287_R3659
262.1
Non-Vd2 gdTCR nTPM: 342.2
Samples: 4
Max nTPM: 467.9
Min nTPM: 233.6
RHH5235_R3607
233.6
RHH5264_R3636
322.7
RHH5207_R3578
344.6
RHH5299_R3665
467.9
T-reg nTPM: 337.4
Samples: 4
Max nTPM: 474.5
Min nTPM: 220.5
RHH5301_R3667
474.5
RHH5237_R3609
371.0
RHH5266_R3638
220.5
RHH5209_R3580
283.6
Terminal effector memory CD4 T-cell nTPM: 280.8
Samples: 2
Max nTPM: 366.4
Min nTPM: 195.1
RHH5243_R3615
195.1
RHH5272_R3644
366.4
Terminal effector memory CD8 T-cell nTPM: 427.4
Samples: 4
Max nTPM: 727.9
Min nTPM: 242.6
RHH5232_R3604
340.4
RHH5204_R3575
727.9
RHH5261_R3633
242.6
RHH5296_R3662
398.5
Vd2 gdTCR nTPM: 368.8
Samples: 4
Max nTPM: 505.2
Min nTPM: 211.3
RHH5234_R3606
300.5
RHH5206_R3577
505.2
RHH5263_R3635
211.3
RHH5298_R3664
458.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.