HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:91.7 nTPM
HPA Brain:69.8 nTPM
GTEx:91.7 nTPM
FANTOM5:89.8 Scaled Tags Per Million
Pig:43.9 nTPM
Mouse:24.2 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044038
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.8
Sample id Sample description nTPM
Hippocampus
nTPM: 63.0
1898 Male, age 80, left hemisphere 81.1
2621 Female, age 67, right hemisphere 68.9
1855 Male, age 76, left hemisphere 65.0
2148 Female, age 91, left hemisphere 58.6
2529 Female, age 94, left hemisphere 53.5
1911 Female, age 85, right hemisphere 50.9
Dentate gyrus
nTPM: 60.7
1927 Female, age 91, both hemispheres 74.1
2530 Female, age 94, left hemisphere 67.7
2010 Male, age 76, both hemispheres 66.6
2246 Female, age 85, both hemispheres 54.6
2528 Male, age 74, both hemispheres 53.5
2531 Female, age 67, both hemispheres 47.7
Entorhinal gyrus
nTPM: 55.8
2613 Female, age 94, left hemisphere 63.6
2764 Male, age 80, right hemisphere 59.3
1938 Female, age 85, left hemisphere 58.6
1787 Male, age 76, left hemisphere 57.4
2686 Male, age 75, right hemisphere 49.6
2117 Female, age 91, right hemisphere 46.5
Hippocampus, CA1
nTPM: 69.1
2749 Male, age 80, left hemisphere 110.5
1873 Female, age 85, both hemispheres 69.2
2527 Male, age 74, both hemispheres 65.2
2082 Female, age 91, right hemisphere 58.4
2045 Male, age 76, both hemispheres 42.2
Hippocampus, CA2
nTPM: 66.0
1963 Male, age 80, left hemisphere 95.1
1892 Male, age 76, both hemispheres 81.4
2437 Female, age 94, left hemisphere 59.3
2249 Male, age 74, both hemispheres 55.0
1940 Female, age 85, left hemisphere 53.5
2113 Female, age 91, right hemisphere 51.5
Hippocampus, CA3
nTPM: 59.1
2137 Male, age 80, left hemisphere 85.2
2861 Female, age 67, both hemispheres 65.2
1867 Male, age 76, both hemispheres 59.9
1891 Female, age 85, both hemispheres 50.4
2436 Male, age 74, both hemispheres 48.8
2620 Female, age 94, left hemisphere 45.1
Parahippocampal cortex
nTPM: 58.0
2245 Female, age 91, both hemispheres 65.0
1850 Male, age 80, both hemispheres 64.8
2250 Female, age 67, right hemisphere 63.4
1933 Female, age 85, both hemispheres 61.2
1990 Female, age 91, right hemisphere 58.7
2693 Female, age 94, both hemispheres 56.9
2622 Female, age 67, right hemisphere 55.3
2018 Male, age 76, both hemispheres 54.9
2692 Male, age 74, both hemispheres 51.8
2532 Female, age 72, left hemisphere 48.1
Perirhinal gyrus
nTPM: 69.8
1847 Female, age 91, left hemisphere 86.9
1794 Male, age 80, right hemisphere 72.8
2521 Female, age 94, right hemisphere 69.3
1841 Female, age 85, right hemisphere 68.5
2848 Male, age 76, right hemisphere 51.7
Subiculum
nTPM: 52.6
1901 Male, age 80, both hemispheres 61.9
1977 Female, age 85, both hemispheres 56.6
2619 Male, age 74, both hemispheres 55.9
2729 Female, age 91, right hemisphere 49.6
2438 Female, age 94, left hemisphere 48.2
2042 Male, age 76, both hemispheres 43.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.7
Samples: 197

Max nTPM: 284.4
Min nTPM: 13.9
Std nTPM: 45.6
Median nTPM: 87.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 284.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 262.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 224.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 219.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 218.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 206.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 198.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 197.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 175.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 166.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 160.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.8
FF:10169-103B7 60 years, female 109.0
FF:10153-102I9 76 years, female 70.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.9
Pig sample Sample description nTPM
Subiculum
nTPM: 40.6
Samples: 4

Max nTPM: 52.4
Min nTPM: 32.8
Sample A Female 52.4
Sample B Female 38.8
Sample C Male 38.4
Sample D Male 32.8
Dorsal hippocampus
nTPM: 44.0
Samples: 4

Max nTPM: 50.3
Min nTPM: 33.4
Sample A Female 50.3
Sample B Female 48.0
Sample C Male 33.4
Sample D Male 44.1
Entorhinal cortex
nTPM: 43.3
Samples: 4

Max nTPM: 49.5
Min nTPM: 37.3
Sample A Female 41.3
Sample B Female 49.5
Sample C Male 45.0
Sample D Male 37.3
Ventral hippocampus
nTPM: 41.3
Samples: 4

Max nTPM: 46.7
Min nTPM: 33.1
Sample A Female 33.1
Sample B Female 44.7
Sample C Male 40.5
Sample D Male 46.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 24.8
Min nTPM: 23.3
Sample A Male 23.3
Sample B Male 24.8
Sample C Female 24.4
Sample D Female 24.5
Hippocampal formation
nTPM: 24.0
Samples: 4

Max nTPM: 29.2
Min nTPM: 19.5
Sample A Male 29.2
Sample B Male 24.6
Sample C Female 19.5
Sample D Female 22.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70194600 Antisense, RP_050517_01_G01, Mouse strain C57BL/6J (56 days, male) 0.3

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