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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
56.0
nTPM
Monaco:
68.5
nTPM
Schmiedel:
72.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.0
HPA sample
nTPM
gdT-cell nTPM: 34.8
Samples: 6
Max nTPM: 42.0
Min nTPM: 27.0
P10809_1007
27.0
P10809_1022
42.0
P10809_1041
38.4
P10809_1060
29.0
P10809_1077
36.4
P10809_1098
35.8
MAIT T-cell nTPM: 38.8
Samples: 6
Max nTPM: 52.4
Min nTPM: 25.4
P10809_1006
38.3
P10809_1024
47.8
P10809_1043
52.4
P10809_1062
32.9
P10809_1083
35.9
P10809_1097
25.4
Memory CD4 T-cell nTPM: 38.4
Samples: 6
Max nTPM: 50.7
Min nTPM: 33.8
P10809_1014
34.1
P10809_1026
38.1
P10809_1045
50.7
P10809_1064
34.0
P10809_1086
39.9
P10809_1113
33.8
Memory CD8 T-cell nTPM: 40.0
Samples: 5
Max nTPM: 50.2
Min nTPM: 34.9
P10809_1012
38.9
P10809_1027
50.2
P10809_1046
39.1
P10809_1065
36.7
P10809_1111
34.9
Naive CD4 T-cell nTPM: 46.2
Samples: 6
Max nTPM: 58.5
Min nTPM: 38.3
P10809_1015
41.4
P10809_1030
47.9
P10809_1049
50.2
P10809_1068
58.5
P10809_1085
40.7
P10809_1112
38.3
Naive CD8 T-cell nTPM: 32.2
Samples: 6
Max nTPM: 35.9
Min nTPM: 23.6
P10809_1016
34.5
P10809_1031
33.1
P10809_1050
35.9
P10809_1069
32.3
P10809_1087
33.9
P10809_1110
23.6
T-reg nTPM: 56.1
Samples: 6
Max nTPM: 70.4
Min nTPM: 43.3
P10809_1018
47.6
P10809_1037
58.2
P10809_1056
70.4
P10809_1075
54.0
P10809_1094
62.8
P10809_1106
43.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 66.0
Samples: 4
Max nTPM: 74.3
Min nTPM: 56.3
RHH5202_R3573
70.7
RHH5230_R3602
74.3
RHH5259_R3631
56.3
RHH5288_R3660
62.8
Effector memory CD8 T-cell nTPM: 63.6
Samples: 4
Max nTPM: 93.7
Min nTPM: 42.7
RHH5203_R3574
93.7
RHH5231_R3603
59.4
RHH5260_R3632
42.7
RHH5289_R3661
58.6
MAIT T-cell nTPM: 54.0
Samples: 4
Max nTPM: 72.3
Min nTPM: 39.7
RHH5233_R3605
72.3
RHH5205_R3576
55.8
RHH5262_R3634
39.7
RHH5297_R3663
48.3
Memory CD4 T-cell TFH nTPM: 59.5
Samples: 4
Max nTPM: 65.3
Min nTPM: 56.1
RHH5300_R3666
65.3
RHH5236_R3608
56.1
RHH5265_R3637
56.8
RHH5208_R3579
59.6
Memory CD4 T-cell Th1 nTPM: 53.4
Samples: 4
Max nTPM: 59.3
Min nTPM: 44.0
RHH5210_R3581
54.8
RHH5302_R3668
59.3
RHH5238_R3610
44.0
RHH5267_R3639
55.3
Memory CD4 T-cell Th1/Th17 nTPM: 46.3
Samples: 4
Max nTPM: 57.2
Min nTPM: 35.8
RHH5303_R3669
57.2
RHH5211_R3582
35.8
RHH5239_R3611
45.6
RHH5268_R3640
46.6
Memory CD4 T-cell Th17 nTPM: 60.2
Samples: 4
Max nTPM: 69.6
Min nTPM: 51.9
RHH5304_R3670
60.4
RHH5212_R3583
69.6
RHH5240_R3612
51.9
RHH5269_R3641
58.7
Memory CD4 T-cell Th2 nTPM: 52.9
Samples: 4
Max nTPM: 66.8
Min nTPM: 42.6
RHH5305_R3671
58.0
RHH5213_R3584
42.6
RHH5241_R3613
44.2
RHH5270_R3642
66.8
Naive CD4 T-cell nTPM: 60.2
Samples: 4
Max nTPM: 73.1
Min nTPM: 54.2
RHH5306_R3672
55.6
RHH5214_R3585
54.2
RHH5242_R3614
57.7
RHH5271_R3643
73.1
Naive CD8 T-cell nTPM: 57.3
Samples: 4
Max nTPM: 77.8
Min nTPM: 46.4
RHH5201_R3572
77.8
RHH5229_R3601
48.5
RHH5258_R3630
56.4
RHH5287_R3659
46.4
Non-Vd2 gdTCR nTPM: 65.1
Samples: 4
Max nTPM: 82.3
Min nTPM: 53.4
RHH5235_R3607
53.4
RHH5264_R3636
57.8
RHH5207_R3578
82.3
RHH5299_R3665
66.7
T-reg nTPM: 61.9
Samples: 4
Max nTPM: 76.7
Min nTPM: 42.6
RHH5301_R3667
70.1
RHH5237_R3609
76.7
RHH5266_R3638
58.3
RHH5209_R3580
42.6
Terminal effector memory CD4 T-cell nTPM: 53.1
Samples: 2
Max nTPM: 65.2
Min nTPM: 41.0
RHH5243_R3615
65.2
RHH5272_R3644
41.0
Terminal effector memory CD8 T-cell nTPM: 68.5
Samples: 4
Max nTPM: 73.4
Min nTPM: 58.8
RHH5232_R3604
70.7
RHH5204_R3575
73.4
RHH5261_R3633
58.8
RHH5296_R3662
71.0
Vd2 gdTCR nTPM: 59.8
Samples: 4
Max nTPM: 71.8
Min nTPM: 53.1
RHH5234_R3606
54.2
RHH5206_R3577
71.8
RHH5263_R3635
53.1
RHH5298_R3664
60.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
