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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
29.0
nTPM
Monaco:
13.0
nTPM
Schmiedel:
10.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
29.0
HPA sample
nTPM
gdT-cell nTPM: 16.6
Samples: 6
Max nTPM: 24.7
Min nTPM: 6.8
P10809_1007
22.7
P10809_1022
17.3
P10809_1041
17.5
P10809_1060
6.8
P10809_1077
10.8
P10809_1098
24.7
MAIT T-cell nTPM: 16.7
Samples: 6
Max nTPM: 21.9
Min nTPM: 6.2
P10809_1006
20.0
P10809_1024
20.5
P10809_1043
19.5
P10809_1062
6.2
P10809_1083
11.8
P10809_1097
21.9
Memory CD4 T-cell nTPM: 23.1
Samples: 6
Max nTPM: 42.4
Min nTPM: 2.9
P10809_1014
31.4
P10809_1026
31.7
P10809_1045
20.4
P10809_1064
2.9
P10809_1086
9.6
P10809_1113
42.4
Memory CD8 T-cell nTPM: 15.5
Samples: 5
Max nTPM: 21.4
Min nTPM: 7.3
P10809_1012
21.4
P10809_1027
16.4
P10809_1046
14.7
P10809_1065
7.3
P10809_1111
17.7
Naive CD4 T-cell nTPM: 29.0
Samples: 6
Max nTPM: 59.3
Min nTPM: 7.4
P10809_1015
52.3
P10809_1030
27.7
P10809_1049
16.5
P10809_1068
10.9
P10809_1085
7.4
P10809_1112
59.3
Naive CD8 T-cell nTPM: 15.2
Samples: 6
Max nTPM: 25.7
Min nTPM: 2.2
P10809_1016
25.7
P10809_1031
16.0
P10809_1050
11.7
P10809_1069
2.2
P10809_1087
10.8
P10809_1110
24.9
T-reg nTPM: 2.7
Samples: 6
Max nTPM: 5.6
Min nTPM: 0.8
P10809_1018
2.3
P10809_1037
1.8
P10809_1056
2.3
P10809_1075
0.8
P10809_1094
3.2
P10809_1106
5.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
13.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 3.7
Samples: 4
Max nTPM: 7.9
Min nTPM: 1.0
RHH5202_R3573
7.9
RHH5230_R3602
2.4
RHH5259_R3631
1.0
RHH5288_R3660
3.6
Effector memory CD8 T-cell nTPM: 1.9
Samples: 4
Max nTPM: 3.2
Min nTPM: 0.4
RHH5203_R3574
3.2
RHH5231_R3603
1.4
RHH5260_R3632
2.6
RHH5289_R3661
0.4
MAIT T-cell nTPM: 5.7
Samples: 4
Max nTPM: 9.5
Min nTPM: 2.2
RHH5233_R3605
5.2
RHH5205_R3576
9.5
RHH5262_R3634
5.8
RHH5297_R3663
2.2
Memory CD4 T-cell TFH nTPM: 4.4
Samples: 4
Max nTPM: 8.2
Min nTPM: 0.6
RHH5300_R3666
8.2
RHH5236_R3608
5.1
RHH5265_R3637
3.7
RHH5208_R3579
0.6
Memory CD4 T-cell Th1 nTPM: 7.5
Samples: 4
Max nTPM: 13.2
Min nTPM: 2.1
RHH5210_R3581
2.7
RHH5302_R3668
11.8
RHH5238_R3610
13.2
RHH5267_R3639
2.1
Memory CD4 T-cell Th1/Th17 nTPM: 13.1
Samples: 4
Max nTPM: 21.2
Min nTPM: 7.0
RHH5303_R3669
21.2
RHH5211_R3582
10.6
RHH5239_R3611
7.0
RHH5268_R3640
13.5
Memory CD4 T-cell Th17 nTPM: 4.4
Samples: 4
Max nTPM: 7.5
Min nTPM: 1.0
RHH5304_R3670
7.5
RHH5212_R3583
5.1
RHH5240_R3612
1.0
RHH5269_R3641
4.1
Memory CD4 T-cell Th2 nTPM: 2.4
Samples: 4
Max nTPM: 4.1
Min nTPM: 0.6
RHH5305_R3671
4.1
RHH5213_R3584
3.3
RHH5241_R3613
1.5
RHH5270_R3642
0.6
Naive CD4 T-cell nTPM: 6.2
Samples: 4
Max nTPM: 8.4
Min nTPM: 3.2
RHH5306_R3672
8.1
RHH5214_R3585
4.9
RHH5242_R3614
3.2
RHH5271_R3643
8.4
Naive CD8 T-cell nTPM: 1.9
Samples: 4
Max nTPM: 4.5
Min nTPM: 0.0
RHH5201_R3572
0.7
RHH5229_R3601
0.0
RHH5258_R3630
4.5
RHH5287_R3659
2.3
Non-Vd2 gdTCR nTPM: 6.8
Samples: 4
Max nTPM: 11.7
Min nTPM: 1.2
RHH5235_R3607
9.0
RHH5264_R3636
11.7
RHH5207_R3578
1.2
RHH5299_R3665
5.4
T-reg nTPM: 3.5
Samples: 4
Max nTPM: 5.2
Min nTPM: 0.9
RHH5301_R3667
3.5
RHH5237_R3609
5.2
RHH5266_R3638
4.4
RHH5209_R3580
0.9
Terminal effector memory CD4 T-cell nTPM: 2.0
Samples: 2
Max nTPM: 2.1
Min nTPM: 1.8
RHH5243_R3615
1.8
RHH5272_R3644
2.1
Terminal effector memory CD8 T-cell nTPM: 11.4
Samples: 4
Max nTPM: 24.9
Min nTPM: 2.5
RHH5232_R3604
2.5
RHH5204_R3575
24.9
RHH5261_R3633
15.6
RHH5296_R3662
2.6
Vd2 gdTCR nTPM: 7.0
Samples: 4
Max nTPM: 8.2
Min nTPM: 5.2
RHH5234_R3606
8.2
RHH5206_R3577
7.0
RHH5263_R3635
5.2
RHH5298_R3664
7.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
