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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
133.9
nTPM
Monaco:
47.4
nTPM
Schmiedel:
325.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
133.9
HPA sample
nTPM
gdT-cell nTPM: 76.6
Samples: 6
Max nTPM: 112.9
Min nTPM: 50.1
P10809_1007
84.8
P10809_1022
76.9
P10809_1041
112.9
P10809_1060
50.1
P10809_1077
61.7
P10809_1098
73.3
MAIT T-cell nTPM: 119.0
Samples: 6
Max nTPM: 134.1
Min nTPM: 75.5
P10809_1006
122.5
P10809_1024
133.0
P10809_1043
130.5
P10809_1062
118.6
P10809_1083
75.5
P10809_1097
134.1
Memory CD4 T-cell nTPM: 111.1
Samples: 6
Max nTPM: 166.7
Min nTPM: 60.7
P10809_1014
134.8
P10809_1026
166.7
P10809_1045
113.7
P10809_1064
79.7
P10809_1086
60.7
P10809_1113
111.0
Memory CD8 T-cell nTPM: 98.1
Samples: 5
Max nTPM: 133.1
Min nTPM: 63.0
P10809_1012
133.1
P10809_1027
112.8
P10809_1046
99.7
P10809_1065
63.0
P10809_1111
82.0
Naive CD4 T-cell nTPM: 133.9
Samples: 6
Max nTPM: 183.9
Min nTPM: 91.4
P10809_1015
140.3
P10809_1030
183.9
P10809_1049
91.4
P10809_1068
140.8
P10809_1085
97.6
P10809_1112
149.5
Naive CD8 T-cell nTPM: 127.3
Samples: 6
Max nTPM: 238.2
Min nTPM: 38.8
P10809_1016
238.2
P10809_1031
165.3
P10809_1050
99.3
P10809_1069
107.3
P10809_1087
38.8
P10809_1110
114.9
T-reg nTPM: 97.4
Samples: 6
Max nTPM: 121.5
Min nTPM: 85.1
P10809_1018
99.6
P10809_1037
87.3
P10809_1056
121.5
P10809_1075
85.1
P10809_1094
104.4
P10809_1106
86.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 26.8
Samples: 4
Max nTPM: 39.4
Min nTPM: 19.2
RHH5202_R3573
21.6
RHH5230_R3602
19.2
RHH5259_R3631
26.8
RHH5288_R3660
39.4
Effector memory CD8 T-cell nTPM: 14.5
Samples: 4
Max nTPM: 21.6
Min nTPM: 8.8
RHH5203_R3574
21.6
RHH5231_R3603
13.5
RHH5260_R3632
13.9
RHH5289_R3661
8.8
MAIT T-cell nTPM: 32.4
Samples: 4
Max nTPM: 45.8
Min nTPM: 13.3
RHH5233_R3605
13.3
RHH5205_R3576
30.6
RHH5262_R3634
39.8
RHH5297_R3663
45.8
Memory CD4 T-cell TFH nTPM: 39.5
Samples: 4
Max nTPM: 66.5
Min nTPM: 23.8
RHH5300_R3666
66.5
RHH5236_R3608
31.5
RHH5265_R3637
23.8
RHH5208_R3579
36.2
Memory CD4 T-cell Th1 nTPM: 44.4
Samples: 4
Max nTPM: 73.2
Min nTPM: 28.1
RHH5210_R3581
36.1
RHH5302_R3668
73.2
RHH5238_R3610
40.3
RHH5267_R3639
28.1
Memory CD4 T-cell Th1/Th17 nTPM: 40.6
Samples: 4
Max nTPM: 52.4
Min nTPM: 30.0
RHH5303_R3669
52.4
RHH5211_R3582
46.5
RHH5239_R3611
30.0
RHH5268_R3640
33.5
Memory CD4 T-cell Th17 nTPM: 35.7
Samples: 4
Max nTPM: 47.3
Min nTPM: 20.3
RHH5304_R3670
47.3
RHH5212_R3583
43.1
RHH5240_R3612
20.3
RHH5269_R3641
32.2
Memory CD4 T-cell Th2 nTPM: 44.9
Samples: 4
Max nTPM: 53.5
Min nTPM: 26.8
RHH5305_R3671
48.1
RHH5213_R3584
53.5
RHH5241_R3613
51.2
RHH5270_R3642
26.8
Naive CD4 T-cell nTPM: 45.0
Samples: 4
Max nTPM: 66.9
Min nTPM: 31.5
RHH5306_R3672
37.9
RHH5214_R3585
66.9
RHH5242_R3614
31.5
RHH5271_R3643
43.5
Naive CD8 T-cell nTPM: 33.3
Samples: 4
Max nTPM: 42.8
Min nTPM: 17.1
RHH5201_R3572
32.9
RHH5229_R3601
17.1
RHH5258_R3630
40.4
RHH5287_R3659
42.8
Non-Vd2 gdTCR nTPM: 23.8
Samples: 4
Max nTPM: 31.8
Min nTPM: 14.9
RHH5235_R3607
24.7
RHH5264_R3636
23.9
RHH5207_R3578
14.9
RHH5299_R3665
31.8
T-reg nTPM: 40.8
Samples: 4
Max nTPM: 74.3
Min nTPM: 25.4
RHH5301_R3667
74.3
RHH5237_R3609
31.8
RHH5266_R3638
25.4
RHH5209_R3580
31.6
Terminal effector memory CD4 T-cell nTPM: 27.4
Samples: 2
Max nTPM: 32.3
Min nTPM: 22.5
RHH5243_R3615
22.5
RHH5272_R3644
32.3
Terminal effector memory CD8 T-cell nTPM: 34.0
Samples: 4
Max nTPM: 59.6
Min nTPM: 15.9
RHH5232_R3604
15.9
RHH5204_R3575
59.6
RHH5261_R3633
22.3
RHH5296_R3662
38.0
Vd2 gdTCR nTPM: 47.5
Samples: 4
Max nTPM: 100.0
Min nTPM: 16.8
RHH5234_R3606
22.1
RHH5206_R3577
50.9
RHH5263_R3635
16.8
RHH5298_R3664
100.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
