HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:40.5 nTPM
HPA Brain:84.9 nTPM
GTEx:40.5 nTPM
FANTOM5:50.9 Scaled Tags Per Million
Pig:43.8 nTPM
Mouse:105.3 nTPM
Allen mouse:13.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022800Antibody HPA023567
Glial cells LowLow
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.9
Sample id Sample description nTPM
Hippocampus
nTPM: 82.0
2621 Female, age 67, right hemisphere 89.8
2529 Female, age 94, left hemisphere 89.1
2148 Female, age 91, left hemisphere 83.1
1911 Female, age 85, right hemisphere 79.1
1898 Male, age 80, left hemisphere 75.9
1855 Male, age 76, left hemisphere 75.2
Dentate gyrus
nTPM: 79.6
2531 Female, age 67, both hemispheres 92.2
2530 Female, age 94, left hemisphere 84.1
1927 Female, age 91, both hemispheres 82.2
2010 Male, age 76, both hemispheres 76.7
2246 Female, age 85, both hemispheres 76.0
2528 Male, age 74, both hemispheres 66.4
Entorhinal gyrus
nTPM: 84.9
2613 Female, age 94, left hemisphere 93.1
2764 Male, age 80, right hemisphere 88.8
2686 Male, age 75, right hemisphere 87.6
1787 Male, age 76, left hemisphere 84.4
1938 Female, age 85, left hemisphere 78.6
2117 Female, age 91, right hemisphere 76.9
Hippocampus, CA1
nTPM: 79.0
2749 Male, age 80, left hemisphere 83.5
2045 Male, age 76, both hemispheres 81.4
1873 Female, age 85, both hemispheres 80.4
2527 Male, age 74, both hemispheres 79.4
2082 Female, age 91, right hemisphere 70.3
Hippocampus, CA2
nTPM: 76.4
2437 Female, age 94, left hemisphere 80.9
1963 Male, age 80, left hemisphere 80.7
1940 Female, age 85, left hemisphere 78.2
1892 Male, age 76, both hemispheres 76.8
2113 Female, age 91, right hemisphere 75.7
2249 Male, age 74, both hemispheres 66.4
Hippocampus, CA3
nTPM: 81.1
2861 Female, age 67, both hemispheres 108.5
2620 Female, age 94, left hemisphere 91.4
2137 Male, age 80, left hemisphere 80.1
1891 Female, age 85, both hemispheres 77.8
1867 Male, age 76, both hemispheres 67.2
2436 Male, age 74, both hemispheres 61.8
Parahippocampal cortex
nTPM: 81.5
2622 Female, age 67, right hemisphere 93.2
2245 Female, age 91, both hemispheres 89.2
2693 Female, age 94, both hemispheres 84.4
1850 Male, age 80, both hemispheres 82.3
2532 Female, age 72, left hemisphere 80.5
2018 Male, age 76, both hemispheres 78.8
1933 Female, age 85, both hemispheres 78.5
2250 Female, age 67, right hemisphere 76.8
2692 Male, age 74, both hemispheres 76.0
1990 Female, age 91, right hemisphere 75.0
Perirhinal gyrus
nTPM: 84.1
1847 Female, age 91, left hemisphere 85.1
1841 Female, age 85, right hemisphere 84.7
1794 Male, age 80, right hemisphere 84.4
2521 Female, age 94, right hemisphere 84.2
2848 Male, age 76, right hemisphere 82.1
Subiculum
nTPM: 73.6
2619 Male, age 74, both hemispheres 79.1
1901 Male, age 80, both hemispheres 75.1
1977 Female, age 85, both hemispheres 74.1
2042 Male, age 76, both hemispheres 74.0
2729 Female, age 91, right hemisphere 72.6
2438 Female, age 94, left hemisphere 66.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.5
Samples: 197

Max nTPM: 70.0
Min nTPM: 22.0
Std nTPM: 8.7
Median nTPM: 39.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 70.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 66.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 64.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 63.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 61.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 61.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 59.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 58.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 58.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 57.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 56.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.9
FF:10153-102I9 76 years, female 53.1
FF:10169-103B7 60 years, female 48.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.8
Pig sample Sample description nTPM
Subiculum
nTPM: 43.7
Samples: 4

Max nTPM: 49.8
Min nTPM: 39.1
Sample A Female 49.8
Sample B Female 43.3
Sample C Male 42.7
Sample D Male 39.1
Dorsal hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 41.1
Min nTPM: 36.2
Sample A Female 40.4
Sample B Female 41.1
Sample C Male 36.2
Sample D Male 37.7
Entorhinal cortex
nTPM: 43.3
Samples: 4

Max nTPM: 44.0
Min nTPM: 41.5
Sample A Female 43.9
Sample B Female 41.5
Sample C Male 43.7
Sample D Male 44.0
Ventral hippocampus
nTPM: 38.5
Samples: 4

Max nTPM: 42.7
Min nTPM: 34.3
Sample A Female 34.3
Sample B Female 37.4
Sample C Male 42.7
Sample D Male 39.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 105.3
Samples: 4

Max nTPM: 114.6
Min nTPM: 95.5
Sample A Male 95.5
Sample B Male 106.4
Sample C Female 104.6
Sample D Female 114.6
Hippocampal formation
nTPM: 88.9
Samples: 4

Max nTPM: 91.5
Min nTPM: 85.7
Sample A Male 88.9
Sample B Male 91.5
Sample C Female 89.6
Sample D Female 85.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.1
71656894 Antisense, RP_050927_04_E04, Mouse strain C57BL/6J (56 days, male) 13.1

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