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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
131.9
nTPM
Monaco:
34.5
nTPM
Schmiedel:
87.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.9
HPA sample
nTPM
gdT-cell nTPM: 74.4
Samples: 6
Max nTPM: 84.8
Min nTPM: 65.9
P10809_1007
76.0
P10809_1022
68.8
P10809_1041
71.0
P10809_1060
65.9
P10809_1077
80.0
P10809_1098
84.8
MAIT T-cell nTPM: 88.4
Samples: 6
Max nTPM: 110.5
Min nTPM: 67.1
P10809_1006
67.1
P10809_1024
100.7
P10809_1043
73.3
P10809_1062
83.9
P10809_1083
94.7
P10809_1097
110.5
Memory CD4 T-cell nTPM: 103.6
Samples: 6
Max nTPM: 124.8
Min nTPM: 86.9
P10809_1014
94.2
P10809_1026
105.6
P10809_1045
101.3
P10809_1064
86.9
P10809_1086
108.5
P10809_1113
124.8
Memory CD8 T-cell nTPM: 93.8
Samples: 5
Max nTPM: 117.0
Min nTPM: 80.4
P10809_1012
83.0
P10809_1027
105.8
P10809_1046
83.0
P10809_1065
80.4
P10809_1111
117.0
Naive CD4 T-cell nTPM: 106.3
Samples: 6
Max nTPM: 129.4
Min nTPM: 93.2
P10809_1015
98.7
P10809_1030
129.4
P10809_1049
112.3
P10809_1068
93.2
P10809_1085
97.4
P10809_1112
106.8
Naive CD8 T-cell nTPM: 93.6
Samples: 6
Max nTPM: 101.3
Min nTPM: 85.1
P10809_1016
101.3
P10809_1031
88.8
P10809_1050
90.8
P10809_1069
85.1
P10809_1087
95.4
P10809_1110
100.0
T-reg nTPM: 131.8
Samples: 6
Max nTPM: 157.9
Min nTPM: 101.9
P10809_1018
101.9
P10809_1037
157.9
P10809_1056
121.9
P10809_1075
125.3
P10809_1094
144.0
P10809_1106
140.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 26.7
Samples: 4
Max nTPM: 40.4
Min nTPM: 14.4
RHH5202_R3573
14.4
RHH5230_R3602
27.6
RHH5259_R3631
40.4
RHH5288_R3660
24.2
Effector memory CD8 T-cell nTPM: 20.9
Samples: 4
Max nTPM: 31.4
Min nTPM: 15.7
RHH5203_R3574
16.7
RHH5231_R3603
19.7
RHH5260_R3632
31.4
RHH5289_R3661
15.7
MAIT T-cell nTPM: 23.4
Samples: 4
Max nTPM: 26.4
Min nTPM: 16.7
RHH5233_R3605
16.7
RHH5205_R3576
25.3
RHH5262_R3634
25.0
RHH5297_R3663
26.4
Memory CD4 T-cell TFH nTPM: 23.2
Samples: 4
Max nTPM: 37.2
Min nTPM: 17.9
RHH5300_R3666
19.3
RHH5236_R3608
37.2
RHH5265_R3637
17.9
RHH5208_R3579
18.4
Memory CD4 T-cell Th1 nTPM: 31.5
Samples: 4
Max nTPM: 44.5
Min nTPM: 15.9
RHH5210_R3581
15.9
RHH5302_R3668
30.4
RHH5238_R3610
44.5
RHH5267_R3639
35.1
Memory CD4 T-cell Th1/Th17 nTPM: 28.8
Samples: 4
Max nTPM: 36.9
Min nTPM: 22.5
RHH5303_R3669
26.4
RHH5211_R3582
22.5
RHH5239_R3611
29.4
RHH5268_R3640
36.9
Memory CD4 T-cell Th17 nTPM: 24.8
Samples: 4
Max nTPM: 29.7
Min nTPM: 18.7
RHH5304_R3670
29.0
RHH5212_R3583
18.7
RHH5240_R3612
29.7
RHH5269_R3641
21.6
Memory CD4 T-cell Th2 nTPM: 27.6
Samples: 4
Max nTPM: 33.6
Min nTPM: 24.7
RHH5305_R3671
33.6
RHH5213_R3584
26.2
RHH5241_R3613
26.0
RHH5270_R3642
24.7
Naive CD4 T-cell nTPM: 30.3
Samples: 4
Max nTPM: 37.0
Min nTPM: 19.9
RHH5306_R3672
37.0
RHH5214_R3585
36.8
RHH5242_R3614
19.9
RHH5271_R3643
27.5
Naive CD8 T-cell nTPM: 31.3
Samples: 4
Max nTPM: 44.1
Min nTPM: 22.1
RHH5201_R3572
22.6
RHH5229_R3601
44.1
RHH5258_R3630
22.1
RHH5287_R3659
36.4
Non-Vd2 gdTCR nTPM: 22.7
Samples: 4
Max nTPM: 25.2
Min nTPM: 20.4
RHH5235_R3607
25.2
RHH5264_R3636
20.4
RHH5207_R3578
21.3
RHH5299_R3665
23.9
T-reg nTPM: 28.1
Samples: 4
Max nTPM: 32.1
Min nTPM: 23.8
RHH5301_R3667
26.7
RHH5237_R3609
29.6
RHH5266_R3638
23.8
RHH5209_R3580
32.1
Terminal effector memory CD4 T-cell nTPM: 21.7
Samples: 2
Max nTPM: 26.1
Min nTPM: 17.2
RHH5243_R3615
26.1
RHH5272_R3644
17.2
Terminal effector memory CD8 T-cell nTPM: 30.7
Samples: 4
Max nTPM: 48.9
Min nTPM: 16.1
RHH5232_R3604
16.1
RHH5204_R3575
48.9
RHH5261_R3633
37.2
RHH5296_R3662
20.6
Vd2 gdTCR nTPM: 34.6
Samples: 4
Max nTPM: 54.8
Min nTPM: 20.9
RHH5234_R3606
20.9
RHH5206_R3577
54.8
RHH5263_R3635
28.8
RHH5298_R3664
33.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
