HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:16.8 nTPM
HPA Brain:13.0 nTPM
GTEx:16.8 nTPM
FANTOM5:9.5 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:5.1 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011198
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
2529 Female, age 94, left hemisphere 14.3
1911 Female, age 85, right hemisphere 13.6
2621 Female, age 67, right hemisphere 11.8
1898 Male, age 80, left hemisphere 11.4
2148 Female, age 91, left hemisphere 10.4
1855 Male, age 76, left hemisphere 10.3
Dentate gyrus
nTPM: 12.9
2530 Female, age 94, left hemisphere 17.0
2528 Male, age 74, both hemispheres 13.5
2010 Male, age 76, both hemispheres 13.3
2246 Female, age 85, both hemispheres 13.0
1927 Female, age 91, both hemispheres 10.4
2531 Female, age 67, both hemispheres 10.1
Entorhinal gyrus
nTPM: 11.9
2117 Female, age 91, right hemisphere 13.1
2764 Male, age 80, right hemisphere 13.0
2613 Female, age 94, left hemisphere 11.7
1787 Male, age 76, left hemisphere 11.6
1938 Female, age 85, left hemisphere 11.5
2686 Male, age 75, right hemisphere 10.8
Hippocampus, CA1
nTPM: 12.9
2527 Male, age 74, both hemispheres 14.3
1873 Female, age 85, both hemispheres 13.7
2749 Male, age 80, left hemisphere 13.6
2082 Female, age 91, right hemisphere 12.8
2045 Male, age 76, both hemispheres 10.2
Hippocampus, CA2
nTPM: 12.3
2113 Female, age 91, right hemisphere 13.5
2249 Male, age 74, both hemispheres 13.5
1963 Male, age 80, left hemisphere 13.0
2437 Female, age 94, left hemisphere 11.9
1892 Male, age 76, both hemispheres 11.3
1940 Female, age 85, left hemisphere 10.9
Hippocampus, CA3
nTPM: 11.3
1891 Female, age 85, both hemispheres 13.1
1867 Male, age 76, both hemispheres 12.7
2620 Female, age 94, left hemisphere 11.4
2137 Male, age 80, left hemisphere 11.0
2436 Male, age 74, both hemispheres 10.4
2861 Female, age 67, both hemispheres 9.1
Parahippocampal cortex
nTPM: 12.7
2250 Female, age 67, right hemisphere 14.7
2692 Male, age 74, both hemispheres 14.5
2018 Male, age 76, both hemispheres 14.0
1850 Male, age 80, both hemispheres 13.6
1990 Female, age 91, right hemisphere 13.0
2245 Female, age 91, both hemispheres 12.7
2532 Female, age 72, left hemisphere 12.0
1933 Female, age 85, both hemispheres 11.7
2693 Female, age 94, both hemispheres 10.7
2622 Female, age 67, right hemisphere 10.4
Perirhinal gyrus
nTPM: 11.4
1794 Male, age 80, right hemisphere 12.0
2848 Male, age 76, right hemisphere 11.6
1841 Female, age 85, right hemisphere 11.4
2521 Female, age 94, right hemisphere 11.3
1847 Female, age 91, left hemisphere 10.5
Subiculum
nTPM: 13.0
1977 Female, age 85, both hemispheres 14.3
2438 Female, age 94, left hemisphere 13.3
2042 Male, age 76, both hemispheres 12.9
1901 Male, age 80, both hemispheres 12.5
2729 Female, age 91, right hemisphere 12.5
2619 Male, age 74, both hemispheres 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.8
Samples: 197

Max nTPM: 37.5
Min nTPM: 6.6
Std nTPM: 5.1
Median nTPM: 15.9
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 37.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 37.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 36.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 36.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 35.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 32.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 29.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 29.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 26.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 24.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.5
FF:10169-103B7 60 years, female 10.3
FF:10153-102I9 76 years, female 8.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Subiculum
nTPM: 9.3
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.0
Sample A Female 9.9
Sample B Female 9.5
Sample C Male 9.9
Sample D Male 8.0
Dorsal hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.6
Sample A Female 11.1
Sample B Female 9.2
Sample C Male 10.7
Sample D Male 8.6
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.6
Sample A Female 8.8
Sample B Female 9.9
Sample C Male 8.8
Sample D Male 8.6
Ventral hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 10.8
Min nTPM: 9.0
Sample A Female 9.7
Sample B Female 9.0
Sample C Male 10.0
Sample D Male 10.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 4.9
Min nTPM: 4.5
Sample A Male 4.9
Sample B Male 4.9
Sample C Female 4.5
Sample D Female 4.5
Hippocampal formation
nTPM: 5.1
Samples: 4

Max nTPM: 5.8
Min nTPM: 3.8
Sample A Male 3.8
Sample B Male 5.3
Sample C Female 5.5
Sample D Female 5.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
68798406 Antisense, RP_050215_02_D06, Mouse strain C57BL/6J (56 days, male) 1.0

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