HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:45.4 nTPM
HPA Brain:72.6 nTPM
GTEx:45.4 nTPM
FANTOM5:128.1 Scaled Tags Per Million
Mouse:19.6 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006960
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.6
Sample id Sample description nTPM
Hippocampus
nTPM: 61.8
1855 Male, age 76, left hemisphere 65.8
2529 Female, age 94, left hemisphere 65.8
1911 Female, age 85, right hemisphere 64.9
2621 Female, age 67, right hemisphere 62.2
1898 Male, age 80, left hemisphere 59.6
2148 Female, age 91, left hemisphere 52.4
Dentate gyrus
nTPM: 56.1
2530 Female, age 94, left hemisphere 73.0
2010 Male, age 76, both hemispheres 71.6
2528 Male, age 74, both hemispheres 56.2
2246 Female, age 85, both hemispheres 54.2
2531 Female, age 67, both hemispheres 41.6
1927 Female, age 91, both hemispheres 40.0
Entorhinal gyrus
nTPM: 57.0
2117 Female, age 91, right hemisphere 84.5
2764 Male, age 80, right hemisphere 59.9
1787 Male, age 76, left hemisphere 59.6
2686 Male, age 75, right hemisphere 48.9
1938 Female, age 85, left hemisphere 46.4
2613 Female, age 94, left hemisphere 42.6
Hippocampus, CA1
nTPM: 53.4
2082 Female, age 91, right hemisphere 60.9
2045 Male, age 76, both hemispheres 57.3
2527 Male, age 74, both hemispheres 56.9
1873 Female, age 85, both hemispheres 52.7
2749 Male, age 80, left hemisphere 39.2
Hippocampus, CA2
nTPM: 60.7
2249 Male, age 74, both hemispheres 70.7
1963 Male, age 80, left hemisphere 63.0
2113 Female, age 91, right hemisphere 62.8
1940 Female, age 85, left hemisphere 61.5
2437 Female, age 94, left hemisphere 61.1
1892 Male, age 76, both hemispheres 45.1
Hippocampus, CA3
nTPM: 51.9
1891 Female, age 85, both hemispheres 70.5
2436 Male, age 74, both hemispheres 66.6
1867 Male, age 76, both hemispheres 66.5
2137 Male, age 80, left hemisphere 41.1
2861 Female, age 67, both hemispheres 34.1
2620 Female, age 94, left hemisphere 32.5
Parahippocampal cortex
nTPM: 49.8
2018 Male, age 76, both hemispheres 73.0
2692 Male, age 74, both hemispheres 64.4
2532 Female, age 72, left hemisphere 58.1
1990 Female, age 91, right hemisphere 52.6
1850 Male, age 80, both hemispheres 48.5
2245 Female, age 91, both hemispheres 45.7
1933 Female, age 85, both hemispheres 44.4
2250 Female, age 67, right hemisphere 43.9
2693 Female, age 94, both hemispheres 38.7
2622 Female, age 67, right hemisphere 28.1
Perirhinal gyrus
nTPM: 39.6
2521 Female, age 94, right hemisphere 52.7
2848 Male, age 76, right hemisphere 39.4
1794 Male, age 80, right hemisphere 37.9
1847 Female, age 91, left hemisphere 36.8
1841 Female, age 85, right hemisphere 31.2
Subiculum
nTPM: 72.6
2042 Male, age 76, both hemispheres 109.0
1901 Male, age 80, both hemispheres 77.7
2438 Female, age 94, left hemisphere 73.1
1977 Female, age 85, both hemispheres 60.4
2619 Male, age 74, both hemispheres 58.2
2729 Female, age 91, right hemisphere 57.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.4
Samples: 197

Max nTPM: 104.7
Min nTPM: 9.9
Std nTPM: 18.6
Median nTPM: 41.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 104.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 98.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 90.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 86.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 85.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 83.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 81.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 79.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 77.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 76.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 76.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 128.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.1
FF:10169-103B7 60 years, female 177.5
FF:10153-102I9 76 years, female 78.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.7
Samples: 4

Max nTPM: 17.0
Min nTPM: 6.7
Sample A Male 17.0
Sample B Male 13.2
Sample C Female 9.9
Sample D Female 6.7
Hippocampal formation
nTPM: 19.7
Samples: 4

Max nTPM: 22.9
Min nTPM: 18.2
Sample A Male 18.3
Sample B Male 19.2
Sample C Female 22.9
Sample D Female 18.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68269586 Antisense, RP_041129_01_H03, Mouse strain C57BL/6J (56 days, male) 0.3

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