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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
137.0
nTPM
FANTOM5:
196.4
Scaled Tags Per Million
Allen mouse:
0.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
137.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 122.7
2301
Female, age 85, both hemispheres
151.1
2188
Female, age 91, both hemispheres
132.4
2090
Male, age 80, both hemispheres
131.0
1984
Male, age 76, both hemispheres
76.4
Dorsal cochlear nucleus nTPM: 113.3
2378
Male, age 80, both hemispheres
131.0
2187
Female, age 91, both hemispheres
117.5
2370
Male, age 61, both hemispheres
116.7
2058
Male, age 76, both hemispheres
104.1
2802
Male, age 74, right hemisphere
97.1
Dorsal tegmental nucleus nTPM: 113.3
2358
Male, age 61, both hemispheres
141.7
2083
Male, age 80, both hemispheres
113.9
2326
Male, age 74, both hemispheres
112.5
1936
Male, age 76, left hemisphere
85.1
Dorsolateral tegmental area nTPM: 132.6
2337
Male, age 61, both hemispheres
252.1
2751
Female, age 85, both hemispheres
132.0
2654
Male, age 80, both hemispheres
116.5
2360
Male, age 74, both hemispheres
90.5
2141
Male, age 76, both hemispheres
71.9
Kolliker-Fuse nucleus nTPM: 118.7
2793
Female, age 91, left hemisphere
139.1
2315
Male, age 76, right hemisphere
113.4
2163
Male, age 80, both hemispheres
103.6
Lateral lemniscal nuclei nTPM: 105.3
2746
Female, age 85, left hemisphere
123.3
2320
Female, age 91, left hemisphere
118.0
2036
Male, age 80, both hemispheres
106.9
2453
Male, age 74, right hemisphere
91.1
2169
Male, age 76, both hemispheres
87.2
Lateral parabrachial nucleus nTPM: 126.8
2792
Male, age 76, both hemispheres
171.5
2013
Male, age 80, both hemispheres
124.3
2790
Male, age 61, both hemispheres
116.4
2139
Female, age 85, right hemisphere
95.0
Lateral vestibular nucleus nTPM: 112.8
2311
Male, age 80, both hemispheres
125.2
2184
Male, age 76, both hemispheres
100.5
Locus coeruleus nTPM: 70.7
2162
Male, age 80, both hemispheres
83.9
2317
Female, age 72, unknown
78.7
2720
Male, age 74, both hemispheres
77.9
2123
Female, age 91, both hemispheres
68.6
1980
Male, age 76, both hemispheres
67.6
2788
Male, age 74, unknown
60.7
2014
Male, age 55, unknown
57.9
Medial parabrachial nucleus nTPM: 113.2
2170
Female, age 91, both hemispheres
121.4
2854
Male, age 80, both hemispheres
119.0
2463
Female, age 85, right hemisphere
113.3
2156
Male, age 61, both hemispheres
106.3
2786
Male, age 76, both hemispheres
106.1
Medial periolivary nuclei nTPM: 102.3
2081
Male, age 80, both hemispheres
143.6
2791
Male, age 74, right hemisphere
114.5
2458
Female, age 91, both hemispheres
107.2
2063
Male, age 76, both hemispheres
77.8
2171
Female, age 85, both hemispheres
68.3
Motor facial nucleus nTPM: 100.7
2697
Female, age 85, both hemispheres
126.9
2126
Male, age 61, both hemispheres
125.3
2365
Male, age 74, right hemisphere
123.0
2795
Female, age 91, both hemispheres
84.3
2327
Male, age 80, both hemispheres
72.5
2062
Male, age 76, both hemispheres
72.2
Motor trigeminal nucleus nTPM: 105.9
2335
Male, age 61, both hemispheres
114.2
2560
Male, age 74, both hemispheres
110.6
2079
Male, age 80, both hemispheres
102.7
2321
Female, age 91, both hemispheres
102.6
2309
Male, age 76, both hemispheres
99.6
Nuclei of the trapezoid body nTPM: 81.3
2166
Male, age 80, both hemispheres
100.4
2368
Female, age 91, both hemispheres
89.4
1983
Male, age 76, both hemispheres
81.7
2159
Male, age 61, both hemispheres
70.0
2735
Female, age 85, both hemispheres
65.1
Nucleus raphe magnus nTPM: 85.3
2051
Male, age 76, both hemispheres
122.6
2459
Female, age 91, both hemispheres
101.1
2328
Male, age 80, both hemispheres
93.1
2455
Male, age 74, both hemispheres
86.4
2172
Female, age 85, both hemispheres
59.3
2160
Male, age 61, both hemispheres
49.3
Paramedian reticular nucleus nTPM: 105.6
2052
Male, age 76, both hemispheres
120.3
2057
Male, age 80, both hemispheres
108.1
2050
Female, age 85, both hemispheres
100.0
2313
Male, age 61, both hemispheres
93.8
Pedunculopontine tegmental nucleus nTPM: 111.0
2338
Male, age 61, both hemispheres
150.3
2334
Male, age 80, both hemispheres
106.5
1921
Female, age 85, both hemispheres
76.2
Pontine nuclei nTPM: 107.8
2115
Male, age 80, left hemisphere
132.6
2454
Male, age 74, left hemisphere
130.7
2319
Female, age 91, both hemispheres
126.7
2109
Female, age 72, unknown
115.0
1863
Male, age 55, unknown
108.8
1968
Male, age 76, left hemisphere
96.9
2787
Female, age 85, both hemispheres
84.1
2727
Male, age 61, right hemisphere
67.6
Pontine raphe nucleus nTPM: 78.0
2853
Male, age 76, midline
79.7
2122
Female, age 85, midline
76.2
Posteroventral cochlear nucleus nTPM: 126.5
2135
Female, age 91, both hemispheres
155.8
2341
Male, age 80, both hemispheres
151.5
2070
Male, age 76, both hemispheres
121.6
2371
Male, age 61, both hemispheres
119.9
2752
Female, age 85, both hemispheres
83.6
Principal sensory trigeminal nucleus nTPM: 89.2
2367
Female, age 91, left hemisphere
122.7
2324
Male, age 76, both hemispheres
92.9
2008
Male, age 80, left hemisphere
79.6
2158
Male, age 61, both hemispheres
61.6
Reticular pontine nucleus, caudal nTPM: 103.9
2559
Male, age 74, both hemispheres
121.8
2457
Female, age 91, both hemispheres
106.7
2092
Male, age 76, both hemispheres
104.9
2332
Male, age 80, right hemisphere
82.2
Reticular pontine nucleus, oral nTPM: 114.1
2366
Female, age 91, both hemispheres
134.7
2361
Male, age 74, both hemispheres
120.8
1939
Male, age 80, both hemispheres
109.7
2012
Female, age 85, both hemispheres
103.6
2167
Male, age 76, both hemispheres
101.9
Reticulotegmental nucleus nTPM: 95.5
2333
Male, age 80, both hemispheres
104.8
2452
Male, age 74, both hemispheres
100.2
2322
Female, age 91, both hemispheres
96.8
2325
Male, age 76, both hemispheres
80.3
Spinal trigeminal nucleus, oral nTPM: 89.0
2164
Male, age 80, both hemispheres
102.3
1978
Male, age 76, both hemispheres
92.0
2737
Female, age 85, both hemispheres
72.7
Subcoeruleus area nTPM: 100.7
2369
Female, age 85, left hemisphere
150.3
1958
Male, age 80, both hemispheres
97.8
2089
Male, age 76, left hemisphere
93.8
2451
Male, age 74, both hemispheres
84.6
2323
Female, age 91, left hemisphere
77.1
Superior olive nTPM: 106.1
2364
Male, age 74, right hemisphere
120.8
2329
Male, age 80, right hemisphere
107.7
2020
Male, age 76, both hemispheres
107.0
2561
Female, age 91, both hemispheres
104.4
1875
Female, age 85, both hemispheres
90.8
Ventral periolivary nuclei nTPM: 95.0
2023
Male, age 76, both hemispheres
133.8
2794
Female, age 91, left hemisphere
87.1
2165
Male, age 80, both hemispheres
83.2
2130
Female, age 85, both hemispheres
76.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 137.0
2359
Male, age 61, both hemispheres
280.3
2840
Female, age 85, both hemispheres
131.4
2161
Male, age 80, both hemispheres
110.9
2456
Female, age 91, both hemispheres
105.7
1959
Male, age 76, both hemispheres
97.2
2449
Male, age 74, both hemispheres
96.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
