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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
460.5
nTPM
Monaco:
1884.1
nTPM
Schmiedel:
244.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
460.5
HPA sample
nTPM
gdT-cell nTPM: 460.5
Samples: 6
Max nTPM: 591.2
Min nTPM: 355.0
P10809_1007
514.3
P10809_1022
591.2
P10809_1041
502.4
P10809_1060
355.0
P10809_1077
427.4
P10809_1098
372.6
MAIT T-cell nTPM: 277.7
Samples: 6
Max nTPM: 337.0
Min nTPM: 237.7
P10809_1006
337.0
P10809_1024
307.4
P10809_1043
255.2
P10809_1062
274.4
P10809_1083
254.4
P10809_1097
237.7
Memory CD4 T-cell nTPM: 284.8
Samples: 6
Max nTPM: 340.7
Min nTPM: 217.0
P10809_1014
287.3
P10809_1026
300.4
P10809_1045
296.8
P10809_1064
340.7
P10809_1086
266.6
P10809_1113
217.0
Memory CD8 T-cell nTPM: 412.6
Samples: 5
Max nTPM: 449.1
Min nTPM: 351.9
P10809_1012
449.1
P10809_1027
398.6
P10809_1046
443.7
P10809_1065
419.7
P10809_1111
351.9
Naive CD4 T-cell nTPM: 319.9
Samples: 6
Max nTPM: 351.7
Min nTPM: 292.7
P10809_1015
351.7
P10809_1030
300.2
P10809_1049
351.5
P10809_1068
320.5
P10809_1085
302.7
P10809_1112
292.7
Naive CD8 T-cell nTPM: 382.4
Samples: 6
Max nTPM: 434.8
Min nTPM: 332.5
P10809_1016
379.8
P10809_1031
354.9
P10809_1050
384.0
P10809_1069
434.8
P10809_1087
408.5
P10809_1110
332.5
T-reg nTPM: 351.2
Samples: 6
Max nTPM: 393.4
Min nTPM: 319.9
P10809_1018
373.0
P10809_1037
393.4
P10809_1056
345.4
P10809_1075
337.9
P10809_1094
319.9
P10809_1106
337.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1884.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 657.8
Samples: 4
Max nTPM: 709.1
Min nTPM: 533.7
RHH5202_R3573
691.8
RHH5230_R3602
696.6
RHH5259_R3631
533.7
RHH5288_R3660
709.1
Effector memory CD8 T-cell nTPM: 1520.3
Samples: 4
Max nTPM: 1618.7
Min nTPM: 1433.8
RHH5203_R3574
1618.7
RHH5231_R3603
1514.1
RHH5260_R3632
1433.8
RHH5289_R3661
1514.4
MAIT T-cell nTPM: 834.4
Samples: 4
Max nTPM: 1110.2
Min nTPM: 672.4
RHH5233_R3605
735.0
RHH5205_R3576
1110.2
RHH5262_R3634
819.8
RHH5297_R3663
672.4
Memory CD4 T-cell TFH nTPM: 492.3
Samples: 4
Max nTPM: 580.0
Min nTPM: 389.2
RHH5300_R3666
451.8
RHH5236_R3608
580.0
RHH5265_R3637
389.2
RHH5208_R3579
548.2
Memory CD4 T-cell Th1 nTPM: 576.7
Samples: 4
Max nTPM: 653.3
Min nTPM: 484.6
RHH5210_R3581
653.3
RHH5302_R3668
607.0
RHH5238_R3610
484.6
RHH5267_R3639
561.7
Memory CD4 T-cell Th1/Th17 nTPM: 536.7
Samples: 4
Max nTPM: 636.0
Min nTPM: 409.3
RHH5303_R3669
613.9
RHH5211_R3582
636.0
RHH5239_R3611
409.3
RHH5268_R3640
487.7
Memory CD4 T-cell Th17 nTPM: 501.8
Samples: 4
Max nTPM: 568.5
Min nTPM: 356.3
RHH5304_R3670
568.5
RHH5212_R3583
533.8
RHH5240_R3612
548.4
RHH5269_R3641
356.3
Memory CD4 T-cell Th2 nTPM: 529.6
Samples: 4
Max nTPM: 598.4
Min nTPM: 398.5
RHH5305_R3671
581.5
RHH5213_R3584
539.9
RHH5241_R3613
598.4
RHH5270_R3642
398.5
Naive CD4 T-cell nTPM: 632.3
Samples: 4
Max nTPM: 671.9
Min nTPM: 567.1
RHH5306_R3672
621.1
RHH5214_R3585
671.9
RHH5242_R3614
669.0
RHH5271_R3643
567.1
Naive CD8 T-cell nTPM: 658.0
Samples: 4
Max nTPM: 802.3
Min nTPM: 555.0
RHH5201_R3572
802.3
RHH5229_R3601
555.0
RHH5258_R3630
560.8
RHH5287_R3659
714.0
Non-Vd2 gdTCR nTPM: 1884.1
Samples: 4
Max nTPM: 2371.1
Min nTPM: 1447.5
RHH5235_R3607
1703.3
RHH5264_R3636
2014.5
RHH5207_R3578
2371.1
RHH5299_R3665
1447.5
T-reg nTPM: 583.7
Samples: 4
Max nTPM: 650.0
Min nTPM: 515.5
RHH5301_R3667
566.5
RHH5237_R3609
650.0
RHH5266_R3638
515.5
RHH5209_R3580
602.6
Terminal effector memory CD4 T-cell nTPM: 1538.5
Samples: 2
Max nTPM: 1591.6
Min nTPM: 1485.4
RHH5243_R3615
1591.6
RHH5272_R3644
1485.4
Terminal effector memory CD8 T-cell nTPM: 1710.5
Samples: 4
Max nTPM: 1867.3
Min nTPM: 1517.2
RHH5232_R3604
1841.1
RHH5204_R3575
1867.3
RHH5261_R3633
1616.3
RHH5296_R3662
1517.2
Vd2 gdTCR nTPM: 1342.5
Samples: 4
Max nTPM: 2020.2
Min nTPM: 926.4
RHH5234_R3606
1090.1
RHH5206_R3577
2020.2
RHH5263_R3635
1333.3
RHH5298_R3664
926.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.