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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.3
nTPM
Monaco:
240.9
nTPM
Schmiedel:
253.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.3
HPA sample
nTPM
gdT-cell nTPM: 40.5
Samples: 6
Max nTPM: 67.3
Min nTPM: 24.3
P10809_1007
25.5
P10809_1022
24.3
P10809_1041
34.6
P10809_1060
41.2
P10809_1077
49.9
P10809_1098
67.3
MAIT T-cell nTPM: 61.3
Samples: 6
Max nTPM: 75.0
Min nTPM: 46.3
P10809_1006
51.8
P10809_1024
52.2
P10809_1043
46.3
P10809_1062
75.0
P10809_1083
72.1
P10809_1097
70.3
Memory CD4 T-cell nTPM: 52.4
Samples: 6
Max nTPM: 82.4
Min nTPM: 32.3
P10809_1014
34.3
P10809_1026
32.3
P10809_1045
36.9
P10809_1064
62.6
P10809_1086
82.4
P10809_1113
65.9
Memory CD8 T-cell nTPM: 45.2
Samples: 5
Max nTPM: 70.7
Min nTPM: 24.5
P10809_1012
30.1
P10809_1027
33.6
P10809_1046
24.5
P10809_1065
70.7
P10809_1111
67.1
Naive CD4 T-cell nTPM: 51.1
Samples: 6
Max nTPM: 82.9
Min nTPM: 35.7
P10809_1015
35.7
P10809_1030
36.9
P10809_1049
45.9
P10809_1068
53.9
P10809_1085
82.9
P10809_1112
51.2
Naive CD8 T-cell nTPM: 50.0
Samples: 6
Max nTPM: 84.7
Min nTPM: 31.3
P10809_1016
31.3
P10809_1031
39.4
P10809_1050
41.1
P10809_1069
58.0
P10809_1087
84.7
P10809_1110
45.4
T-reg nTPM: 44.8
Samples: 6
Max nTPM: 55.1
Min nTPM: 30.3
P10809_1018
31.0
P10809_1037
30.3
P10809_1056
48.1
P10809_1075
51.0
P10809_1094
55.1
P10809_1106
53.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
240.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 184.7
Samples: 4
Max nTPM: 275.9
Min nTPM: 130.4
RHH5202_R3573
275.9
RHH5230_R3602
186.8
RHH5259_R3631
130.4
RHH5288_R3660
145.6
Effector memory CD8 T-cell nTPM: 146.1
Samples: 4
Max nTPM: 188.7
Min nTPM: 113.4
RHH5203_R3574
188.7
RHH5231_R3603
161.9
RHH5260_R3632
113.4
RHH5289_R3661
120.2
MAIT T-cell nTPM: 204.3
Samples: 4
Max nTPM: 236.7
Min nTPM: 169.6
RHH5233_R3605
236.7
RHH5205_R3576
230.6
RHH5262_R3634
180.2
RHH5297_R3663
169.6
Memory CD4 T-cell TFH nTPM: 240.9
Samples: 4
Max nTPM: 337.4
Min nTPM: 160.6
RHH5300_R3666
160.6
RHH5236_R3608
293.0
RHH5265_R3637
172.7
RHH5208_R3579
337.4
Memory CD4 T-cell Th1 nTPM: 172.1
Samples: 4
Max nTPM: 242.6
Min nTPM: 126.8
RHH5210_R3581
242.6
RHH5302_R3668
160.4
RHH5238_R3610
158.5
RHH5267_R3639
126.8
Memory CD4 T-cell Th1/Th17 nTPM: 190.7
Samples: 4
Max nTPM: 283.4
Min nTPM: 135.6
RHH5303_R3669
196.5
RHH5211_R3582
283.4
RHH5239_R3611
147.2
RHH5268_R3640
135.6
Memory CD4 T-cell Th17 nTPM: 189.2
Samples: 4
Max nTPM: 254.1
Min nTPM: 123.4
RHH5304_R3670
168.1
RHH5212_R3583
254.1
RHH5240_R3612
211.3
RHH5269_R3641
123.4
Memory CD4 T-cell Th2 nTPM: 205.8
Samples: 4
Max nTPM: 256.3
Min nTPM: 159.2
RHH5305_R3671
159.2
RHH5213_R3584
246.1
RHH5241_R3613
256.3
RHH5270_R3642
161.4
Naive CD4 T-cell nTPM: 183.7
Samples: 4
Max nTPM: 246.0
Min nTPM: 133.2
RHH5306_R3672
144.9
RHH5214_R3585
246.0
RHH5242_R3614
210.6
RHH5271_R3643
133.2
Naive CD8 T-cell nTPM: 180.0
Samples: 4
Max nTPM: 241.3
Min nTPM: 149.3
RHH5201_R3572
241.3
RHH5229_R3601
154.3
RHH5258_R3630
174.9
RHH5287_R3659
149.3
Non-Vd2 gdTCR nTPM: 140.5
Samples: 4
Max nTPM: 183.6
Min nTPM: 106.1
RHH5235_R3607
128.4
RHH5264_R3636
183.6
RHH5207_R3578
143.9
RHH5299_R3665
106.1
T-reg nTPM: 181.3
Samples: 4
Max nTPM: 258.0
Min nTPM: 129.6
RHH5301_R3667
133.8
RHH5237_R3609
258.0
RHH5266_R3638
129.6
RHH5209_R3580
203.8
Terminal effector memory CD4 T-cell nTPM: 140.2
Samples: 2
Max nTPM: 165.4
Min nTPM: 115.0
RHH5243_R3615
115.0
RHH5272_R3644
165.4
Terminal effector memory CD8 T-cell nTPM: 143.7
Samples: 4
Max nTPM: 181.3
Min nTPM: 111.8
RHH5232_R3604
181.3
RHH5204_R3575
150.7
RHH5261_R3633
111.8
RHH5296_R3662
130.9
Vd2 gdTCR nTPM: 202.4
Samples: 4
Max nTPM: 261.2
Min nTPM: 156.6
RHH5234_R3606
261.2
RHH5206_R3577
223.6
RHH5263_R3635
168.3
RHH5298_R3664
156.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
