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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
130.1
nTPM
Monaco:
432.2
nTPM
Schmiedel:
360.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.1
HPA sample
nTPM
gdT-cell nTPM: 104.1
Samples: 6
Max nTPM: 126.6
Min nTPM: 85.2
P10809_1007
85.2
P10809_1022
126.6
P10809_1041
103.7
P10809_1060
97.4
P10809_1077
121.1
P10809_1098
90.5
MAIT T-cell nTPM: 109.1
Samples: 6
Max nTPM: 138.7
Min nTPM: 92.4
P10809_1006
117.9
P10809_1024
138.7
P10809_1043
92.4
P10809_1062
100.0
P10809_1083
105.2
P10809_1097
100.5
Memory CD4 T-cell nTPM: 113.0
Samples: 6
Max nTPM: 121.7
Min nTPM: 95.8
P10809_1014
117.9
P10809_1026
121.7
P10809_1045
95.8
P10809_1064
118.8
P10809_1086
116.7
P10809_1113
107.0
Memory CD8 T-cell nTPM: 112.5
Samples: 5
Max nTPM: 132.5
Min nTPM: 89.7
P10809_1012
132.5
P10809_1027
115.3
P10809_1046
89.7
P10809_1065
128.3
P10809_1111
96.5
Naive CD4 T-cell nTPM: 125.4
Samples: 6
Max nTPM: 138.9
Min nTPM: 106.7
P10809_1015
124.2
P10809_1030
131.4
P10809_1049
126.6
P10809_1068
138.9
P10809_1085
124.6
P10809_1112
106.7
Naive CD8 T-cell nTPM: 107.4
Samples: 6
Max nTPM: 129.3
Min nTPM: 88.9
P10809_1016
112.0
P10809_1031
129.3
P10809_1050
92.2
P10809_1069
108.3
P10809_1087
113.6
P10809_1110
88.9
T-reg nTPM: 130.1
Samples: 6
Max nTPM: 173.8
Min nTPM: 98.5
P10809_1018
120.9
P10809_1037
98.5
P10809_1056
173.8
P10809_1075
158.1
P10809_1094
104.0
P10809_1106
125.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
432.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 364.8
Samples: 4
Max nTPM: 387.8
Min nTPM: 321.6
RHH5202_R3573
387.8
RHH5230_R3602
370.8
RHH5259_R3631
379.1
RHH5288_R3660
321.6
Effector memory CD8 T-cell nTPM: 432.3
Samples: 4
Max nTPM: 506.2
Min nTPM: 379.7
RHH5203_R3574
447.1
RHH5231_R3603
396.0
RHH5260_R3632
379.7
RHH5289_R3661
506.2
MAIT T-cell nTPM: 396.9
Samples: 4
Max nTPM: 460.1
Min nTPM: 334.7
RHH5233_R3605
434.2
RHH5205_R3576
460.1
RHH5262_R3634
358.4
RHH5297_R3663
334.7
Memory CD4 T-cell TFH nTPM: 350.1
Samples: 4
Max nTPM: 385.4
Min nTPM: 308.6
RHH5300_R3666
308.6
RHH5236_R3608
385.4
RHH5265_R3637
353.3
RHH5208_R3579
352.9
Memory CD4 T-cell Th1 nTPM: 332.7
Samples: 4
Max nTPM: 374.6
Min nTPM: 297.8
RHH5210_R3581
358.4
RHH5302_R3668
297.8
RHH5238_R3610
299.9
RHH5267_R3639
374.6
Memory CD4 T-cell Th1/Th17 nTPM: 363.4
Samples: 4
Max nTPM: 419.7
Min nTPM: 312.8
RHH5303_R3669
353.1
RHH5211_R3582
368.1
RHH5239_R3611
419.7
RHH5268_R3640
312.8
Memory CD4 T-cell Th17 nTPM: 385.2
Samples: 4
Max nTPM: 504.1
Min nTPM: 299.9
RHH5304_R3670
375.2
RHH5212_R3583
299.9
RHH5240_R3612
504.1
RHH5269_R3641
361.7
Memory CD4 T-cell Th2 nTPM: 364.6
Samples: 4
Max nTPM: 402.0
Min nTPM: 334.6
RHH5305_R3671
363.7
RHH5213_R3584
402.0
RHH5241_R3613
334.6
RHH5270_R3642
358.0
Naive CD4 T-cell nTPM: 392.3
Samples: 4
Max nTPM: 435.8
Min nTPM: 347.4
RHH5306_R3672
347.4
RHH5214_R3585
427.6
RHH5242_R3614
435.8
RHH5271_R3643
358.2
Naive CD8 T-cell nTPM: 356.2
Samples: 4
Max nTPM: 408.7
Min nTPM: 320.0
RHH5201_R3572
408.7
RHH5229_R3601
354.8
RHH5258_R3630
320.0
RHH5287_R3659
341.1
Non-Vd2 gdTCR nTPM: 405.4
Samples: 4
Max nTPM: 463.7
Min nTPM: 288.7
RHH5235_R3607
414.9
RHH5264_R3636
454.2
RHH5207_R3578
463.7
RHH5299_R3665
288.7
T-reg nTPM: 356.2
Samples: 4
Max nTPM: 434.8
Min nTPM: 300.4
RHH5301_R3667
300.4
RHH5237_R3609
434.8
RHH5266_R3638
356.5
RHH5209_R3580
332.9
Terminal effector memory CD4 T-cell nTPM: 424.3
Samples: 2
Max nTPM: 484.8
Min nTPM: 363.8
RHH5243_R3615
484.8
RHH5272_R3644
363.8
Terminal effector memory CD8 T-cell nTPM: 404.9
Samples: 4
Max nTPM: 445.8
Min nTPM: 379.3
RHH5232_R3604
406.6
RHH5204_R3575
388.0
RHH5261_R3633
445.8
RHH5296_R3662
379.3
Vd2 gdTCR nTPM: 387.6
Samples: 4
Max nTPM: 460.5
Min nTPM: 268.6
RHH5234_R3606
403.4
RHH5206_R3577
417.7
RHH5263_R3635
460.5
RHH5298_R3664
268.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
