We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SPANXN4
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields ยป
Search result

 
Field
All
Term
Gene name
Class
Blood group antigen proteins
Subclass
 
Class
 
Keyword
Chromosome
External id
Tissue
 
Cell type
 
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
 
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Yes
Protein structure
In atlas
Column
Gene


                        • SPECIFICITY
                        • DISTRIBUTION
                        • EXPRESSION
                        • SPECIFICITY
                        • DISTRIBUTION
                        • EXPRESSION
                        • SPECIFICITY
                        • DISTRIBUTION
                        • EXPRESSION
                        • SPECIFICITY
                        • DISTRIBUTION
                        • EXPRESSION
                        • SPECIFICITY
                        • DISTRIBUTION
                        • EXPRESSION
                          • SPECIFICITY
                          • DISTRIBUTION
                          • EXPRESSION
                          • SPECIFICITY
                          • DISTRIBUTION
                          • EXPRESSION
                          • SPECIFICITY
                          • DISTRIBUTION
                          • EXPRESSION
                          • RELIABILITY
                          • SUBCELLULAR VARIATION
                          • MULTILOCALIZATION
                          • OTHER
                          • SPECIFICITY
                          • DISTRIBUTION
                          • EXPRESSION
                          • Check all
                          • Uncheck all
                                  • SUMMARY

                                  • TISSUE

                                  • BRAIN

                                  • SINGLE CELL

                                  • TISSUE CELL

                                  • PATHOLOGY

                                  • DISEASE

                                  • IMMUNE

                                  • BLOOD

                                  • SUBCELL

                                  • CELL LINE

                                  • STRUCTURE

                                  • INTERACTION

                                  • SPANXN4
                                  TISSUE PRIMARY DATA URINARY BLADDER Show tissue menu
                                  ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
                                  ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
                                  OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
                                  SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
                                  ANTIBODIES
                                  AND
                                  VALIDATION
                                  Dictionary
                                  Urinary bladder
                                  Tissue proteome
                                  URINARY BLADDER - Expression summary
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  Consensus:0.0 nTPM
                                  HPA:0.0 nTPM
                                  GTEx:0.0 nTPM
                                  FANTOM5:0.0 Scaled Tags Per Million

                                  URINARY BLADDER - Annotated protein expression
                                  Pending normal tissue analysis

                                  URINARY BLADDER - Antibody stainingi

                                  Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

                                  Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

                                  Antibody HPA045730
                                  Urothelial cells Medium


                                  URINARY BLADDER - HPA RNA-seqi

                                  The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

                                  Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
                                  Average nTPM 0.0
                                  overview
                                  Male, age 74
                                  Urinary bladder sample 264
                                  nTPM: 0
                                  Cell types%
                                  Urothelial cells:
                                  5

                                  Smooth muscle cells:
                                  60

                                  Fibroblasts:
                                  20

                                  Endothelial cells:
                                  10

                                  Other cell types:
                                  5

                                  overview
                                  Male, age 80
                                  Urinary bladder sample 265
                                  nTPM: 0
                                  Cell types%
                                  Urothelial cells:
                                  10

                                  Smooth muscle cells:
                                  45

                                  Fibroblasts:
                                  15

                                  Endothelial cells:
                                  10

                                  Other cell types:
                                  20

                                  N/A
                                  Female, age 0.1
                                  Urinary bladder sample 1597
                                  nTPM: 0
                                  N/A
                                  Female, age 0.1
                                  Urinary bladder sample 1598
                                  nTPM: 0

                                  URINARY BLADDER - GTEx RNA-seqi

                                  RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                  Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 0.0
                                  GTEx sample id Sample description nTPM
                                  0.00.00.00.00.00.000.010.020.030.040.050.060.070.080.090.10
                                  0.00.00.00.00.00.000.010.020.030.040.050.060.070.080.090.10
                                  Bladder
                                  Average nTPM: 0.0
                                  Samples: 21

                                  Max nTPM: 0.1
                                  Min nTPM: 0.0
                                  Std nTPM: 0.0
                                  Median nTPM: 0.0
                                  GTEX-SNMC-0826-SM-4DM66 20-29 years, male 0.1
                                  GTEX-S32W-1126-SM-4AD5V 50-59 years, female 0.0
                                  GTEX-S3XE-1226-SM-4AD4L 50-59 years, male 0.0
                                  GTEX-S4Q7-0926-SM-4AD5D 20-29 years, male 0.0
                                  GTEX-S4UY-0926-SM-4AD6O 40-49 years, female 0.0
                                  GTEX-SE5C-1026-SM-4BRUG 40-49 years, female 0.0
                                  GTEX-SNOS-0526-SM-4DM54 40-49 years, male 0.0
                                  GTEX-TMMY-1526-SM-4DXST 40-49 years, female 0.0
                                  GTEX-U3ZM-0826-SM-4DXU6 40-49 years, male 0.0
                                  GTEX-U3ZN-1226-SM-4DXUD 30-39 years, female 0.0
                                  GTEX-U4B1-1226-SM-4DXT7 40-49 years, male 0.0
                                  GTEX-OIZF-1926-SM-7PBZS 60-69 years, male 0.0
                                  GTEX-P44H-2226-SM-E9U4P 40-49 years, male 0.0
                                  GTEX-QEL4-1826-SM-EZ6KU 50-59 years, male 0.0
                                  GTEX-RN64-2426-SM-EZ6L2 50-59 years, male 0.0
                                  GTEX-RU72-2526-SM-EWRML 50-59 years, female 0.0
                                  GTEX-S33H-1926-SM-EYYVH 30-39 years, male 0.0
                                  GTEX-S95S-0626-SM-EZ6L8 60-69 years, male 0.0
                                  GTEX-T2YK-2326-SM-EZ6LA 50-59 years, male 0.0
                                  GTEX-T5JW-1026-SM-EZ6LR 20-29 years, female 0.0
                                  GTEX-T6MN-2226-SM-EVYAM 50-59 years, male 0.0
                                  Show allShow less

                                  URINARY BLADDER - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 0
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Bladder
                                  Scaled Tags Per Million: 0.0
                                  FF:10011-101C2 55,58,79 years, mixed 0.0

                                  Contact

                                  • NEWS ARTICLES
                                  • PRESS ROOM

                                  The Project

                                  • INTRODUCTION
                                  • ORGANIZATION
                                  • PUBLICATIONS

                                  The Human Protein Atlas

                                  • DOWNLOADABLE DATA
                                  • LICENCE & CITATION
                                  • HELP & FAQ
                                  The Human Protein Atlas project is funded
                                  by the Knut & Alice Wallenberg Foundation.


                                  contact@proteinatlas.org