HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:24.6 nTPM
HPA Brain:63.6 nTPM
GTEx:24.6 nTPM
FANTOM5:43.4 Scaled Tags Per Million
Pig:24.1 nTPM
Mouse:30.3 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA032095Antibody HPA032096
Glial cells Not detectedLow
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 63.6
Sample id Sample description nTPM
Hippocampus
nTPM: 43.5
2529 Female, age 94, left hemisphere 57.7
1898 Male, age 80, left hemisphere 43.9
2621 Female, age 67, right hemisphere 43.4
1911 Female, age 85, right hemisphere 42.3
1855 Male, age 76, left hemisphere 40.0
2148 Female, age 91, left hemisphere 33.4
Dentate gyrus
nTPM: 44.2
2530 Female, age 94, left hemisphere 55.2
2246 Female, age 85, both hemispheres 51.4
2531 Female, age 67, both hemispheres 44.6
2010 Male, age 76, both hemispheres 44.4
2528 Male, age 74, both hemispheres 42.6
1927 Female, age 91, both hemispheres 27.0
Entorhinal gyrus
nTPM: 63.6
2613 Female, age 94, left hemisphere 87.9
2764 Male, age 80, right hemisphere 68.2
2117 Female, age 91, right hemisphere 59.1
1787 Male, age 76, left hemisphere 57.5
1938 Female, age 85, left hemisphere 56.5
2686 Male, age 75, right hemisphere 52.2
Hippocampus, CA1
nTPM: 41.0
2082 Female, age 91, right hemisphere 52.9
2527 Male, age 74, both hemispheres 47.7
1873 Female, age 85, both hemispheres 35.7
2045 Male, age 76, both hemispheres 35.1
2749 Male, age 80, left hemisphere 33.6
Hippocampus, CA2
nTPM: 47.2
2437 Female, age 94, left hemisphere 59.4
1940 Female, age 85, left hemisphere 49.9
2249 Male, age 74, both hemispheres 49.2
2113 Female, age 91, right hemisphere 46.0
1892 Male, age 76, both hemispheres 40.4
1963 Male, age 80, left hemisphere 38.2
Hippocampus, CA3
nTPM: 40.8
1891 Female, age 85, both hemispheres 47.1
2436 Male, age 74, both hemispheres 46.9
1867 Male, age 76, both hemispheres 46.2
2861 Female, age 67, both hemispheres 40.1
2620 Female, age 94, left hemisphere 35.1
2137 Male, age 80, left hemisphere 29.4
Parahippocampal cortex
nTPM: 54.1
2532 Female, age 72, left hemisphere 64.3
2622 Female, age 67, right hemisphere 62.0
1933 Female, age 85, both hemispheres 56.3
2692 Male, age 74, both hemispheres 56.0
1990 Female, age 91, right hemisphere 55.6
2018 Male, age 76, both hemispheres 53.7
1850 Male, age 80, both hemispheres 51.7
2250 Female, age 67, right hemisphere 48.8
2693 Female, age 94, both hemispheres 48.5
2245 Female, age 91, both hemispheres 43.6
Perirhinal gyrus
nTPM: 48.9
2848 Male, age 76, right hemisphere 53.5
1794 Male, age 80, right hemisphere 51.7
1847 Female, age 91, left hemisphere 47.8
1841 Female, age 85, right hemisphere 45.9
2521 Female, age 94, right hemisphere 45.7
Subiculum
nTPM: 54.2
2438 Female, age 94, left hemisphere 63.2
2042 Male, age 76, both hemispheres 55.2
1901 Male, age 80, both hemispheres 54.5
1977 Female, age 85, both hemispheres 54.3
2619 Male, age 74, both hemispheres 51.6
2729 Female, age 91, right hemisphere 46.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.6
Samples: 197

Max nTPM: 40.0
Min nTPM: 10.1
Std nTPM: 5.7
Median nTPM: 24.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 40.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 39.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 38.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 38.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 37.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 36.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 35.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 35.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 35.6
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 35.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 34.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.4
FF:10153-102I9 76 years, female 50.5
FF:10169-103B7 60 years, female 36.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.1
Pig sample Sample description nTPM
Subiculum
nTPM: 18.8
Samples: 4

Max nTPM: 22.1
Min nTPM: 16.1
Sample A Female 22.1
Sample B Female 18.0
Sample C Male 19.1
Sample D Male 16.1
Dorsal hippocampus
nTPM: 13.0
Samples: 4

Max nTPM: 18.1
Min nTPM: 7.3
Sample A Female 14.4
Sample B Female 12.1
Sample C Male 18.1
Sample D Male 7.3
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 24.9
Min nTPM: 22.7
Sample A Female 23.8
Sample B Female 24.8
Sample C Male 22.7
Sample D Male 24.9
Ventral hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 25.8
Min nTPM: 12.7
Sample A Female 20.3
Sample B Female 12.7
Sample C Male 25.8
Sample D Male 15.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.3
Samples: 4

Max nTPM: 32.7
Min nTPM: 27.4
Sample A Male 31.4
Sample B Male 29.7
Sample C Female 27.4
Sample D Female 32.7
Hippocampal formation
nTPM: 23.1
Samples: 4

Max nTPM: 23.8
Min nTPM: 22.2
Sample A Male 22.2
Sample B Male 23.3
Sample C Female 23.1
Sample D Female 23.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
77800935 Antisense, RP_070219_01_B03, Mouse strain C57BL/6J (56 days, male) 2.7
72007937 Antisense, RP_051017_01_B06, Mouse strain C57BL/6J (56 days, male) 1.1
67792208 Antisense, RP_040920_01_E04, Mouse strain C57BL/6J (56 days, male) 0.6

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