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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
21.3
nTPM
Monaco:
19.0
nTPM
Schmiedel:
8.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.3
HPA sample
nTPM
gdT-cell nTPM: 13.6
Samples: 6
Max nTPM: 21.2
Min nTPM: 4.6
P10809_1007
10.4
P10809_1022
12.5
P10809_1041
4.6
P10809_1060
15.6
P10809_1077
21.2
P10809_1098
17.3
MAIT T-cell nTPM: 14.4
Samples: 6
Max nTPM: 22.4
Min nTPM: 8.8
P10809_1006
8.8
P10809_1024
16.1
P10809_1043
16.0
P10809_1062
11.5
P10809_1083
22.4
P10809_1097
11.7
Memory CD4 T-cell nTPM: 14.9
Samples: 6
Max nTPM: 18.8
Min nTPM: 12.2
P10809_1014
13.9
P10809_1026
12.2
P10809_1045
12.8
P10809_1064
15.6
P10809_1086
18.8
P10809_1113
16.0
Memory CD8 T-cell nTPM: 17.6
Samples: 5
Max nTPM: 25.7
Min nTPM: 12.5
P10809_1012
12.5
P10809_1027
15.4
P10809_1046
16.3
P10809_1065
18.0
P10809_1111
25.7
Naive CD4 T-cell nTPM: 14.0
Samples: 6
Max nTPM: 19.3
Min nTPM: 10.5
P10809_1015
11.9
P10809_1030
14.9
P10809_1049
10.5
P10809_1068
13.1
P10809_1085
19.3
P10809_1112
14.1
Naive CD8 T-cell nTPM: 14.1
Samples: 6
Max nTPM: 18.6
Min nTPM: 8.8
P10809_1016
14.3
P10809_1031
8.8
P10809_1050
14.8
P10809_1069
15.6
P10809_1087
18.6
P10809_1110
12.6
T-reg nTPM: 21.3
Samples: 6
Max nTPM: 35.0
Min nTPM: 13.0
P10809_1018
19.6
P10809_1037
26.4
P10809_1056
13.0
P10809_1075
14.0
P10809_1094
35.0
P10809_1106
20.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 16.1
Samples: 4
Max nTPM: 18.9
Min nTPM: 13.1
RHH5202_R3573
14.8
RHH5230_R3602
18.9
RHH5259_R3631
17.4
RHH5288_R3660
13.1
Effector memory CD8 T-cell nTPM: 19.0
Samples: 4
Max nTPM: 29.1
Min nTPM: 11.9
RHH5203_R3574
29.1
RHH5231_R3603
21.3
RHH5260_R3632
11.9
RHH5289_R3661
13.5
MAIT T-cell nTPM: 13.6
Samples: 4
Max nTPM: 17.6
Min nTPM: 7.5
RHH5233_R3605
17.6
RHH5205_R3576
7.5
RHH5262_R3634
16.0
RHH5297_R3663
13.4
Memory CD4 T-cell TFH nTPM: 14.0
Samples: 4
Max nTPM: 19.5
Min nTPM: 7.1
RHH5300_R3666
12.1
RHH5236_R3608
7.1
RHH5265_R3637
17.3
RHH5208_R3579
19.5
Memory CD4 T-cell Th1 nTPM: 14.8
Samples: 4
Max nTPM: 20.7
Min nTPM: 10.9
RHH5210_R3581
11.9
RHH5302_R3668
20.7
RHH5238_R3610
15.7
RHH5267_R3639
10.9
Memory CD4 T-cell Th1/Th17 nTPM: 13.3
Samples: 4
Max nTPM: 22.0
Min nTPM: 8.3
RHH5303_R3669
12.1
RHH5211_R3582
22.0
RHH5239_R3611
8.3
RHH5268_R3640
10.7
Memory CD4 T-cell Th17 nTPM: 12.8
Samples: 4
Max nTPM: 17.4
Min nTPM: 9.9
RHH5304_R3670
9.9
RHH5212_R3583
17.4
RHH5240_R3612
13.3
RHH5269_R3641
10.5
Memory CD4 T-cell Th2 nTPM: 10.5
Samples: 4
Max nTPM: 13.4
Min nTPM: 8.1
RHH5305_R3671
12.1
RHH5213_R3584
8.3
RHH5241_R3613
13.4
RHH5270_R3642
8.1
Naive CD4 T-cell nTPM: 14.2
Samples: 4
Max nTPM: 20.6
Min nTPM: 4.2
RHH5306_R3672
20.6
RHH5214_R3585
20.5
RHH5242_R3614
11.5
RHH5271_R3643
4.2
Naive CD8 T-cell nTPM: 8.9
Samples: 4
Max nTPM: 12.0
Min nTPM: 4.6
RHH5201_R3572
4.6
RHH5229_R3601
9.6
RHH5258_R3630
12.0
RHH5287_R3659
9.5
Non-Vd2 gdTCR nTPM: 18.9
Samples: 4
Max nTPM: 23.9
Min nTPM: 13.0
RHH5235_R3607
23.9
RHH5264_R3636
17.8
RHH5207_R3578
21.0
RHH5299_R3665
13.0
T-reg nTPM: 16.4
Samples: 4
Max nTPM: 20.1
Min nTPM: 14.5
RHH5301_R3667
20.1
RHH5237_R3609
15.6
RHH5266_R3638
14.5
RHH5209_R3580
15.2
Terminal effector memory CD4 T-cell nTPM: 17.7
Samples: 2
Max nTPM: 18.7
Min nTPM: 16.7
RHH5243_R3615
18.7
RHH5272_R3644
16.7
Terminal effector memory CD8 T-cell nTPM: 16.2
Samples: 4
Max nTPM: 20.3
Min nTPM: 11.4
RHH5232_R3604
18.3
RHH5204_R3575
20.3
RHH5261_R3633
11.4
RHH5296_R3662
14.8
Vd2 gdTCR nTPM: 14.1
Samples: 4
Max nTPM: 20.0
Min nTPM: 10.3
RHH5234_R3606
12.7
RHH5206_R3577
20.0
RHH5263_R3635
10.3
RHH5298_R3664
13.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
