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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
191.7
nTPM
FANTOM5:
234.8
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
191.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 188.4
2301
Female, age 85, both hemispheres
213.7
2188
Female, age 91, both hemispheres
204.2
2090
Male, age 80, both hemispheres
185.0
1984
Male, age 76, both hemispheres
150.8
Dorsal cochlear nucleus nTPM: 183.5
2802
Male, age 74, right hemisphere
202.5
2378
Male, age 80, both hemispheres
197.3
2187
Female, age 91, both hemispheres
193.4
2370
Male, age 61, both hemispheres
162.4
2058
Male, age 76, both hemispheres
162.0
Dorsal tegmental nucleus nTPM: 179.1
2326
Male, age 74, both hemispheres
195.2
2083
Male, age 80, both hemispheres
178.3
2358
Male, age 61, both hemispheres
174.2
1936
Male, age 76, left hemisphere
168.7
Dorsolateral tegmental area nTPM: 170.1
2751
Female, age 85, both hemispheres
187.7
2654
Male, age 80, both hemispheres
187.4
2360
Male, age 74, both hemispheres
166.7
2337
Male, age 61, both hemispheres
162.1
2141
Male, age 76, both hemispheres
146.4
Kolliker-Fuse nucleus nTPM: 191.7
2793
Female, age 91, left hemisphere
205.1
2315
Male, age 76, right hemisphere
195.2
2163
Male, age 80, both hemispheres
174.9
Lateral lemniscal nuclei nTPM: 150.7
2320
Female, age 91, left hemisphere
165.7
2453
Male, age 74, right hemisphere
162.4
2746
Female, age 85, left hemisphere
150.2
2169
Male, age 76, both hemispheres
147.1
2036
Male, age 80, both hemispheres
128.3
Lateral parabrachial nucleus nTPM: 178.3
2792
Male, age 76, both hemispheres
249.4
2013
Male, age 80, both hemispheres
176.2
2139
Female, age 85, right hemisphere
150.3
2790
Male, age 61, both hemispheres
137.3
Lateral vestibular nucleus nTPM: 175.0
2311
Male, age 80, both hemispheres
187.6
2184
Male, age 76, both hemispheres
162.3
Locus coeruleus nTPM: 148.7
2720
Male, age 74, both hemispheres
184.6
2162
Male, age 80, both hemispheres
149.3
2123
Female, age 91, both hemispheres
146.5
2788
Male, age 74, unknown
145.9
2014
Male, age 55, unknown
143.3
1980
Male, age 76, both hemispheres
136.4
2317
Female, age 72, unknown
135.1
Medial parabrachial nucleus nTPM: 172.4
2170
Female, age 91, both hemispheres
199.6
2854
Male, age 80, both hemispheres
193.9
2786
Male, age 76, both hemispheres
170.9
2463
Female, age 85, right hemisphere
158.3
2156
Male, age 61, both hemispheres
139.3
Medial periolivary nuclei nTPM: 165.2
2458
Female, age 91, both hemispheres
183.5
2081
Male, age 80, both hemispheres
178.0
2791
Male, age 74, right hemisphere
175.6
2063
Male, age 76, both hemispheres
149.3
2171
Female, age 85, both hemispheres
139.8
Motor facial nucleus nTPM: 176.3
2697
Female, age 85, both hemispheres
207.9
2795
Female, age 91, both hemispheres
195.3
2365
Male, age 74, right hemisphere
187.5
2126
Male, age 61, both hemispheres
169.2
2327
Male, age 80, both hemispheres
156.4
2062
Male, age 76, both hemispheres
141.8
Motor trigeminal nucleus nTPM: 165.8
2321
Female, age 91, both hemispheres
179.4
2560
Male, age 74, both hemispheres
172.1
2309
Male, age 76, both hemispheres
168.1
2335
Male, age 61, both hemispheres
157.2
2079
Male, age 80, both hemispheres
152.4
Nuclei of the trapezoid body nTPM: 162.5
2166
Male, age 80, both hemispheres
181.0
2368
Female, age 91, both hemispheres
172.7
1983
Male, age 76, both hemispheres
165.1
2159
Male, age 61, both hemispheres
162.9
2735
Female, age 85, both hemispheres
131.0
Nucleus raphe magnus nTPM: 156.0
2459
Female, age 91, both hemispheres
179.3
2051
Male, age 76, both hemispheres
171.8
2455
Male, age 74, both hemispheres
163.1
2328
Male, age 80, both hemispheres
162.6
2160
Male, age 61, both hemispheres
132.2
2172
Female, age 85, both hemispheres
127.0
Paramedian reticular nucleus nTPM: 175.7
2052
Male, age 76, both hemispheres
199.8
2313
Male, age 61, both hemispheres
174.6
2057
Male, age 80, both hemispheres
166.7
2050
Female, age 85, both hemispheres
161.6
Pedunculopontine tegmental nucleus nTPM: 179.8
2334
Male, age 80, both hemispheres
197.9
2338
Male, age 61, both hemispheres
180.6
1921
Female, age 85, both hemispheres
160.8
Pontine nuclei nTPM: 162.7
2454
Male, age 74, left hemisphere
201.3
2319
Female, age 91, both hemispheres
200.0
1863
Male, age 55, unknown
162.9
1968
Male, age 76, left hemisphere
157.8
2109
Female, age 72, unknown
157.7
2115
Male, age 80, left hemisphere
153.0
2727
Male, age 61, right hemisphere
141.9
2787
Female, age 85, both hemispheres
126.9
Pontine raphe nucleus nTPM: 150.9
2853
Male, age 76, midline
154.2
2122
Female, age 85, midline
147.6
Posteroventral cochlear nucleus nTPM: 191.6
2135
Female, age 91, both hemispheres
226.9
2341
Male, age 80, both hemispheres
217.9
2371
Male, age 61, both hemispheres
182.7
2752
Female, age 85, both hemispheres
166.0
2070
Male, age 76, both hemispheres
164.4
Principal sensory trigeminal nucleus nTPM: 162.7
2367
Female, age 91, left hemisphere
203.1
2324
Male, age 76, both hemispheres
175.8
2008
Male, age 80, left hemisphere
137.0
2158
Male, age 61, both hemispheres
135.0
Reticular pontine nucleus, caudal nTPM: 166.2
2559
Male, age 74, both hemispheres
183.1
2457
Female, age 91, both hemispheres
172.4
2092
Male, age 76, both hemispheres
158.4
2332
Male, age 80, right hemisphere
150.8
Reticular pontine nucleus, oral nTPM: 178.3
2366
Female, age 91, both hemispheres
206.6
1939
Male, age 80, both hemispheres
184.4
2167
Male, age 76, both hemispheres
182.5
2361
Male, age 74, both hemispheres
160.1
2012
Female, age 85, both hemispheres
158.0
Reticulotegmental nucleus nTPM: 174.9
2322
Female, age 91, both hemispheres
198.5
2333
Male, age 80, both hemispheres
179.7
2452
Male, age 74, both hemispheres
176.6
2325
Male, age 76, both hemispheres
144.7
Spinal trigeminal nucleus, oral nTPM: 164.9
1978
Male, age 76, both hemispheres
170.9
2164
Male, age 80, both hemispheres
169.9
2737
Female, age 85, both hemispheres
154.0
Subcoeruleus area nTPM: 166.0
2369
Female, age 85, left hemisphere
198.2
2451
Male, age 74, both hemispheres
169.1
2323
Female, age 91, left hemisphere
160.5
1958
Male, age 80, both hemispheres
159.8
2089
Male, age 76, left hemisphere
142.3
Superior olive nTPM: 173.0
2561
Female, age 91, both hemispheres
185.8
2364
Male, age 74, right hemisphere
177.0
2020
Male, age 76, both hemispheres
176.3
2329
Male, age 80, right hemisphere
172.4
1875
Female, age 85, both hemispheres
153.4
Ventral periolivary nuclei nTPM: 156.3
2023
Male, age 76, both hemispheres
168.1
2794
Female, age 91, left hemisphere
167.6
2165
Male, age 80, both hemispheres
154.9
2130
Female, age 85, both hemispheres
134.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 172.1
2840
Female, age 85, both hemispheres
194.3
2456
Female, age 91, both hemispheres
180.3
2161
Male, age 80, both hemispheres
175.1
2359
Male, age 61, both hemispheres
168.1
2449
Male, age 74, both hemispheres
158.4
1959
Male, age 76, both hemispheres
156.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
