HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:9.5 nTPM
HPA Brain:13.3 nTPM
GTEx:9.5 nTPM
FANTOM5:14.6 Scaled Tags Per Million
Pig:19.4 nTPM
Mouse:19.1 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024529Antibody CAB020800
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.3
1898 Male, age 80, left hemisphere 14.9
2529 Female, age 94, left hemisphere 14.2
1855 Male, age 76, left hemisphere 13.2
1911 Female, age 85, right hemisphere 12.9
2621 Female, age 67, right hemisphere 12.7
2148 Female, age 91, left hemisphere 11.9
Dentate gyrus
nTPM: 12.4
2010 Male, age 76, both hemispheres 13.4
2246 Female, age 85, both hemispheres 13.2
1927 Female, age 91, both hemispheres 12.8
2528 Male, age 74, both hemispheres 12.4
2530 Female, age 94, left hemisphere 12.1
2531 Female, age 67, both hemispheres 10.7
Entorhinal gyrus
nTPM: 11.9
2117 Female, age 91, right hemisphere 13.9
2764 Male, age 80, right hemisphere 12.9
1938 Female, age 85, left hemisphere 12.2
2686 Male, age 75, right hemisphere 11.4
1787 Male, age 76, left hemisphere 11.1
2613 Female, age 94, left hemisphere 9.8
Hippocampus, CA1
nTPM: 12.5
2749 Male, age 80, left hemisphere 14.0
1873 Female, age 85, both hemispheres 13.1
2527 Male, age 74, both hemispheres 12.2
2082 Female, age 91, right hemisphere 11.7
2045 Male, age 76, both hemispheres 11.3
Hippocampus, CA2
nTPM: 13.2
1892 Male, age 76, both hemispheres 15.2
1963 Male, age 80, left hemisphere 14.8
2249 Male, age 74, both hemispheres 13.4
1940 Female, age 85, left hemisphere 12.8
2437 Female, age 94, left hemisphere 11.6
2113 Female, age 91, right hemisphere 11.5
Hippocampus, CA3
nTPM: 11.5
1867 Male, age 76, both hemispheres 14.2
1891 Female, age 85, both hemispheres 13.5
2137 Male, age 80, left hemisphere 11.5
2436 Male, age 74, both hemispheres 11.3
2861 Female, age 67, both hemispheres 9.3
2620 Female, age 94, left hemisphere 9.0
Parahippocampal cortex
nTPM: 11.5
1850 Male, age 80, both hemispheres 13.2
1933 Female, age 85, both hemispheres 12.6
2018 Male, age 76, both hemispheres 12.2
1990 Female, age 91, right hemisphere 11.9
2245 Female, age 91, both hemispheres 11.9
2250 Female, age 67, right hemisphere 11.4
2532 Female, age 72, left hemisphere 11.4
2692 Male, age 74, both hemispheres 10.9
2693 Female, age 94, both hemispheres 10.4
2622 Female, age 67, right hemisphere 9.0
Perirhinal gyrus
nTPM: 12.8
1794 Male, age 80, right hemisphere 14.0
1847 Female, age 91, left hemisphere 13.7
1841 Female, age 85, right hemisphere 13.2
2848 Male, age 76, right hemisphere 11.8
2521 Female, age 94, right hemisphere 11.1
Subiculum
nTPM: 12.9
1901 Male, age 80, both hemispheres 14.4
2438 Female, age 94, left hemisphere 13.4
1977 Female, age 85, both hemispheres 13.1
2729 Female, age 91, right hemisphere 12.5
2042 Male, age 76, both hemispheres 12.4
2619 Male, age 74, both hemispheres 11.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.5
Samples: 197

Max nTPM: 16.8
Min nTPM: 6.1
Std nTPM: 2.0
Median nTPM: 9.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 16.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 15.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 15.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 15.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 14.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 14.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 14.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 14.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 13.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 13.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 13.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.6
FF:10169-103B7 60 years, female 15.5
FF:10153-102I9 76 years, female 13.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.4
Pig sample Sample description nTPM
Subiculum
nTPM: 19.5
Samples: 4

Max nTPM: 23.0
Min nTPM: 17.1
Sample A Female 23.0
Sample B Female 18.3
Sample C Male 19.4
Sample D Male 17.1
Dorsal hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 25.1
Min nTPM: 12.3
Sample A Female 23.4
Sample B Female 17.0
Sample C Male 25.1
Sample D Male 12.3
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 20.4
Min nTPM: 15.9
Sample A Female 19.3
Sample B Female 20.4
Sample C Male 18.4
Sample D Male 15.9
Ventral hippocampus
nTPM: 17.8
Samples: 4

Max nTPM: 20.1
Min nTPM: 15.1
Sample A Female 19.8
Sample B Female 15.1
Sample C Male 20.1
Sample D Male 16.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 17.7
Min nTPM: 15.6
Sample A Male 17.7
Sample B Male 16.1
Sample C Female 15.6
Sample D Female 17.1
Hippocampal formation
nTPM: 19.2
Samples: 4

Max nTPM: 20.6
Min nTPM: 17.6
Sample A Male 17.6
Sample B Male 19.1
Sample C Female 20.6
Sample D Female 19.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
77800951 Antisense, RP_070219_01_B11, Mouse strain C57BL/6J (56 days, male) 1.9
68441568 Antisense, RP_041214_02_F02, Mouse strain C57BL/6J (56 days, male) 0.4

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