We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Not detected
Neuronal cells:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
44.3
nTPM
HPA Brain:
2.6
nTPM
GTEx:
44.3
nTPM
FANTOM5:
5.9
Scaled Tags Per Million
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA043151
Antibody CAB015400
Antibody CAB034021
Glial cells
Low
Not detected
Not detected
Neuronal cells
Not detected
Not detected
Not detected
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
2.6
Sample id
Sample description
nTPM
Hippocampus nTPM: 2.6
2621
Female, age 67, right hemisphere
4.6
2529
Female, age 94, left hemisphere
2.8
1898
Male, age 80, left hemisphere
2.3
1911
Female, age 85, right hemisphere
2.2
1855
Male, age 76, left hemisphere
2.1
2148
Female, age 91, left hemisphere
1.6
Dentate gyrus nTPM: 2.2
2531
Female, age 67, both hemispheres
2.8
2530
Female, age 94, left hemisphere
2.7
2246
Female, age 85, both hemispheres
2.2
2010
Male, age 76, both hemispheres
2.1
2528
Male, age 74, both hemispheres
2.1
1927
Female, age 91, both hemispheres
1.4
Entorhinal gyrus nTPM: 2.0
2117
Female, age 91, right hemisphere
2.7
2764
Male, age 80, right hemisphere
2.3
1938
Female, age 85, left hemisphere
2.2
1787
Male, age 76, left hemisphere
2.1
2613
Female, age 94, left hemisphere
1.5
2686
Male, age 75, right hemisphere
1.3
Hippocampus, CA1 nTPM: 2.1
2749
Male, age 80, left hemisphere
2.3
1873
Female, age 85, both hemispheres
2.2
2045
Male, age 76, both hemispheres
2.1
2527
Male, age 74, both hemispheres
2.1
2082
Female, age 91, right hemisphere
1.7
Hippocampus, CA2 nTPM: 2.4
2437
Female, age 94, left hemisphere
3.5
1963
Male, age 80, left hemisphere
2.3
2113
Female, age 91, right hemisphere
2.3
1940
Female, age 85, left hemisphere
2.2
1892
Male, age 76, both hemispheres
2.1
2249
Male, age 74, both hemispheres
2.1
Hippocampus, CA3 nTPM: 2.2
2861
Female, age 67, both hemispheres
3.1
2137
Male, age 80, left hemisphere
2.3
1891
Female, age 85, both hemispheres
2.2
1867
Male, age 76, both hemispheres
2.1
2436
Male, age 74, both hemispheres
2.1
2620
Female, age 94, left hemisphere
1.6
Parahippocampal cortex nTPM: 1.9
2250
Female, age 67, right hemisphere
4.6
1850
Male, age 80, both hemispheres
2.3
1933
Female, age 85, both hemispheres
2.2
2018
Male, age 76, both hemispheres
2.1
2692
Male, age 74, both hemispheres
2.1
1990
Female, age 91, right hemisphere
1.2
2245
Female, age 91, both hemispheres
1.2
2693
Female, age 94, both hemispheres
1.2
2532
Female, age 72, left hemisphere
1.0
2622
Female, age 67, right hemisphere
0.6
Perirhinal gyrus nTPM: 2.2
2521
Female, age 94, right hemisphere
3.2
1794
Male, age 80, right hemisphere
2.3
1841
Female, age 85, right hemisphere
2.2
2848
Male, age 76, right hemisphere
2.1
1847
Female, age 91, left hemisphere
1.1
Subiculum nTPM: 2.3
2438
Female, age 94, left hemisphere
2.9
2729
Female, age 91, right hemisphere
2.4
1901
Male, age 80, both hemispheres
2.3
1977
Female, age 85, both hemispheres
2.2
2042
Male, age 76, both hemispheres
2.1
2619
Male, age 74, both hemispheres
2.1
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
44.3
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 44.3
Samples: 197
Max nTPM: 163.5
Min nTPM: 2.6
Std nTPM: 31.8
Median nTPM: 35.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
163.5
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
159.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
159.3
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
157.6
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
145.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
135.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
132.5
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
123.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
115.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
102.9
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
98.1
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
97.5
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
97.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
94.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
93.8
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
93.3
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
89.5
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
87.7
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
86.9
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
86.2
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
85.2
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
83.5
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
82.9
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
80.6
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
77.3
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
76.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
76.3
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
75.4
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
74.0
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
73.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
73.0
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
72.1
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
71.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
70.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
69.9
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
69.8
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
69.1
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
69.0
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
67.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
65.6
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
64.2
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
63.3
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
63.2
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
61.5
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
60.5
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
60.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
59.8
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
59.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
59.2
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
57.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
56.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
56.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
56.0
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
55.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
54.6
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
54.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
52.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
52.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
52.7
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
52.5
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
52.1
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
51.9
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
51.8
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
51.5
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
51.2
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
51.1
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
50.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
49.6
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
49.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
47.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
46.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
46.1
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
45.8
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
44.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
44.7
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
44.1
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
44.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
44.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
42.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
42.5
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
42.0
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
41.8
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
41.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
41.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
40.4
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
40.1
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
40.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
40.0
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
39.6
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
39.5
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
39.0
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
37.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
37.3
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
36.9
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
36.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
36.2
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
35.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
35.3
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
35.3
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
34.7
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
34.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
34.4
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
34.1
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
33.7
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
33.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
32.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
32.6
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
32.0
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
31.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
31.4
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
31.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
31.1
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
30.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
30.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
30.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
30.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
29.3
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
29.2
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
28.9
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
28.9
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
28.4
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
28.4
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
28.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
27.9
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
27.3
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
27.2
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
26.9
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
26.8
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
26.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
26.3
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
26.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
26.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
26.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
25.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
25.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
25.2
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
24.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
24.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
24.6
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
24.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
24.2
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
24.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
23.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
23.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
23.4
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
23.3
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
23.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
22.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
22.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
22.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
21.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
21.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
21.2
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
21.0
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
20.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
19.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
19.8
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
19.7
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
19.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
19.3
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
19.3
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
18.5
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
16.9
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
16.9
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
16.4
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
16.4
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
16.2
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
16.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
15.6
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
15.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
15.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
14.5
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
14.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
13.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
13.8
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
13.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
13.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
13.3
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
13.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
13.2
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
13.0
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
12.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
12.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
11.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
11.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
9.6
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
9.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
8.9
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
8.3
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
8.3
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
8.2
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
8.0
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
7.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
7.0
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
6.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
3.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
2.6
Show allShow less
HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.