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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
28.1
nTPM
Monaco:
178.3
nTPM
Schmiedel:
381.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.1
HPA sample
nTPM
gdT-cell nTPM: 10.4
Samples: 6
Max nTPM: 33.0
Min nTPM: 0.0
P10809_1007
26.2
P10809_1022
2.0
P10809_1041
0.7
P10809_1060
33.0
P10809_1077
0.0
P10809_1098
0.4
MAIT T-cell nTPM: 1.9
Samples: 6
Max nTPM: 6.4
Min nTPM: 0.0
P10809_1006
6.4
P10809_1024
0.3
P10809_1043
0.6
P10809_1062
3.9
P10809_1083
0.0
P10809_1097
0.3
Memory CD4 T-cell nTPM: 8.2
Samples: 6
Max nTPM: 31.1
Min nTPM: 0.3
P10809_1014
13.3
P10809_1026
1.7
P10809_1045
0.3
P10809_1064
31.1
P10809_1086
1.3
P10809_1113
1.3
Memory CD8 T-cell nTPM: 23.1
Samples: 5
Max nTPM: 59.0
Min nTPM: 0.2
P10809_1012
50.6
P10809_1027
2.9
P10809_1046
0.2
P10809_1065
59.0
P10809_1111
2.7
Naive CD4 T-cell nTPM: 1.0
Samples: 6
Max nTPM: 1.6
Min nTPM: 0.6
P10809_1015
1.3
P10809_1030
0.6
P10809_1049
0.7
P10809_1068
1.6
P10809_1085
0.6
P10809_1112
0.9
Naive CD8 T-cell nTPM: 11.0
Samples: 6
Max nTPM: 58.4
Min nTPM: 0.0
P10809_1016
5.0
P10809_1031
1.5
P10809_1050
0.0
P10809_1069
58.4
P10809_1087
0.3
P10809_1110
0.7
T-reg nTPM: 28.2
Samples: 6
Max nTPM: 80.5
Min nTPM: 0.3
P10809_1018
77.0
P10809_1037
6.0
P10809_1056
0.7
P10809_1075
80.5
P10809_1094
0.3
P10809_1106
4.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
178.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.7
Samples: 4
Max nTPM: 66.0
Min nTPM: 1.0
RHH5202_R3573
1.3
RHH5230_R3602
58.6
RHH5259_R3631
66.0
RHH5288_R3660
1.0
Effector memory CD8 T-cell nTPM: 124.9
Samples: 4
Max nTPM: 282.4
Min nTPM: 0.0
RHH5203_R3574
7.7
RHH5231_R3603
282.4
RHH5260_R3632
209.4
RHH5289_R3661
0.0
MAIT T-cell nTPM: 17.8
Samples: 4
Max nTPM: 39.2
Min nTPM: 0.0
RHH5233_R3605
31.5
RHH5205_R3576
0.3
RHH5262_R3634
39.2
RHH5297_R3663
0.0
Memory CD4 T-cell TFH nTPM: 12.1
Samples: 4
Max nTPM: 24.1
Min nTPM: 0.9
RHH5300_R3666
0.9
RHH5236_R3608
24.1
RHH5265_R3637
21.9
RHH5208_R3579
1.3
Memory CD4 T-cell Th1 nTPM: 29.8
Samples: 4
Max nTPM: 67.8
Min nTPM: 0.0
RHH5210_R3581
0.0
RHH5302_R3668
1.4
RHH5238_R3610
50.1
RHH5267_R3639
67.8
Memory CD4 T-cell Th1/Th17 nTPM: 16.5
Samples: 4
Max nTPM: 52.2
Min nTPM: 0.0
RHH5303_R3669
1.1
RHH5211_R3582
0.0
RHH5239_R3611
12.7
RHH5268_R3640
52.2
Memory CD4 T-cell Th17 nTPM: 17.8
Samples: 4
Max nTPM: 38.1
Min nTPM: 0.0
RHH5304_R3670
0.0
RHH5212_R3583
0.0
RHH5240_R3612
33.1
RHH5269_R3641
38.1
Memory CD4 T-cell Th2 nTPM: 30.3
Samples: 4
Max nTPM: 75.9
Min nTPM: 0.0
RHH5305_R3671
0.0
RHH5213_R3584
0.2
RHH5241_R3613
45.2
RHH5270_R3642
75.9
Naive CD4 T-cell nTPM: 5.9
Samples: 4
Max nTPM: 15.6
Min nTPM: 0.4
RHH5306_R3672
0.5
RHH5214_R3585
0.4
RHH5242_R3614
15.6
RHH5271_R3643
7.1
Naive CD8 T-cell nTPM: 1.6
Samples: 4
Max nTPM: 4.3
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
1.4
RHH5258_R3630
4.3
RHH5287_R3659
0.5
Non-Vd2 gdTCR nTPM: 119.6
Samples: 4
Max nTPM: 367.5
Min nTPM: 3.4
RHH5235_R3607
99.8
RHH5264_R3636
367.5
RHH5207_R3578
3.4
RHH5299_R3665
7.6
T-reg nTPM: 38.4
Samples: 4
Max nTPM: 85.1
Min nTPM: 0.4
RHH5301_R3667
2.7
RHH5237_R3609
85.1
RHH5266_R3638
65.4
RHH5209_R3580
0.4
Terminal effector memory CD4 T-cell nTPM: 178.3
Samples: 2
Max nTPM: 219.3
Min nTPM: 137.3
RHH5243_R3615
137.3
RHH5272_R3644
219.3
Terminal effector memory CD8 T-cell nTPM: 125.0
Samples: 4
Max nTPM: 246.2
Min nTPM: 10.6
RHH5232_R3604
246.2
RHH5204_R3575
13.3
RHH5261_R3633
229.8
RHH5296_R3662
10.6
Vd2 gdTCR nTPM: 72.4
Samples: 4
Max nTPM: 157.4
Min nTPM: 1.9
RHH5234_R3606
157.4
RHH5206_R3577
1.9
RHH5263_R3635
125.0
RHH5298_R3664
5.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
