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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.8
nTPM
Monaco:
290.1
nTPM
Schmiedel:
265.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.8
HPA sample
nTPM
gdT-cell nTPM: 10.3
Samples: 6
Max nTPM: 17.0
Min nTPM: 7.3
P10809_1007
7.8
P10809_1022
7.7
P10809_1041
17.0
P10809_1060
10.6
P10809_1077
7.3
P10809_1098
11.4
MAIT T-cell nTPM: 11.4
Samples: 6
Max nTPM: 14.9
Min nTPM: 8.1
P10809_1006
14.9
P10809_1024
10.0
P10809_1043
11.8
P10809_1062
10.7
P10809_1083
12.8
P10809_1097
8.1
Memory CD4 T-cell nTPM: 13.1
Samples: 6
Max nTPM: 24.8
Min nTPM: 7.1
P10809_1014
24.8
P10809_1026
8.2
P10809_1045
17.2
P10809_1064
8.2
P10809_1086
7.1
P10809_1113
13.1
Memory CD8 T-cell nTPM: 9.8
Samples: 5
Max nTPM: 14.4
Min nTPM: 5.4
P10809_1012
12.8
P10809_1027
8.9
P10809_1046
14.4
P10809_1065
5.4
P10809_1111
7.3
Naive CD4 T-cell nTPM: 11.5
Samples: 6
Max nTPM: 16.5
Min nTPM: 7.9
P10809_1015
16.2
P10809_1030
7.9
P10809_1049
8.3
P10809_1068
11.3
P10809_1085
8.6
P10809_1112
16.5
Naive CD8 T-cell nTPM: 6.9
Samples: 6
Max nTPM: 11.5
Min nTPM: 3.8
P10809_1016
11.5
P10809_1031
6.8
P10809_1050
7.5
P10809_1069
3.8
P10809_1087
3.9
P10809_1110
7.7
T-reg nTPM: 19.8
Samples: 6
Max nTPM: 26.8
Min nTPM: 12.4
P10809_1018
26.8
P10809_1037
13.9
P10809_1056
21.1
P10809_1075
12.4
P10809_1094
25.1
P10809_1106
19.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
290.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 232.0
Samples: 4
Max nTPM: 279.7
Min nTPM: 196.4
RHH5202_R3573
203.8
RHH5230_R3602
248.1
RHH5259_R3631
279.7
RHH5288_R3660
196.4
Effector memory CD8 T-cell nTPM: 127.4
Samples: 4
Max nTPM: 162.0
Min nTPM: 93.2
RHH5203_R3574
93.2
RHH5231_R3603
122.5
RHH5260_R3632
162.0
RHH5289_R3661
131.8
MAIT T-cell nTPM: 179.1
Samples: 4
Max nTPM: 208.1
Min nTPM: 149.5
RHH5233_R3605
186.3
RHH5205_R3576
208.1
RHH5262_R3634
172.6
RHH5297_R3663
149.5
Memory CD4 T-cell TFH nTPM: 244.6
Samples: 4
Max nTPM: 292.4
Min nTPM: 199.5
RHH5300_R3666
276.3
RHH5236_R3608
210.1
RHH5265_R3637
292.4
RHH5208_R3579
199.5
Memory CD4 T-cell Th1 nTPM: 282.4
Samples: 4
Max nTPM: 335.0
Min nTPM: 222.6
RHH5210_R3581
222.6
RHH5302_R3668
285.9
RHH5238_R3610
335.0
RHH5267_R3639
286.2
Memory CD4 T-cell Th1/Th17 nTPM: 287.7
Samples: 4
Max nTPM: 362.5
Min nTPM: 209.5
RHH5303_R3669
313.8
RHH5211_R3582
209.5
RHH5239_R3611
362.5
RHH5268_R3640
265.0
Memory CD4 T-cell Th17 nTPM: 286.0
Samples: 4
Max nTPM: 352.7
Min nTPM: 202.4
RHH5304_R3670
272.0
RHH5212_R3583
202.4
RHH5240_R3612
352.7
RHH5269_R3641
316.9
Memory CD4 T-cell Th2 nTPM: 277.8
Samples: 4
Max nTPM: 292.9
Min nTPM: 256.2
RHH5305_R3671
292.9
RHH5213_R3584
256.2
RHH5241_R3613
271.1
RHH5270_R3642
291.0
Naive CD4 T-cell nTPM: 290.1
Samples: 4
Max nTPM: 327.8
Min nTPM: 187.1
RHH5306_R3672
327.8
RHH5214_R3585
187.1
RHH5242_R3614
317.7
RHH5271_R3643
327.7
Naive CD8 T-cell nTPM: 228.6
Samples: 4
Max nTPM: 294.4
Min nTPM: 166.8
RHH5201_R3572
166.8
RHH5229_R3601
294.4
RHH5258_R3630
200.3
RHH5287_R3659
252.7
Non-Vd2 gdTCR nTPM: 92.2
Samples: 4
Max nTPM: 110.0
Min nTPM: 77.4
RHH5235_R3607
110.0
RHH5264_R3636
80.3
RHH5207_R3578
77.4
RHH5299_R3665
101.2
T-reg nTPM: 249.0
Samples: 4
Max nTPM: 261.9
Min nTPM: 236.8
RHH5301_R3667
254.0
RHH5237_R3609
236.8
RHH5266_R3638
243.3
RHH5209_R3580
261.9
Terminal effector memory CD4 T-cell nTPM: 132.1
Samples: 2
Max nTPM: 146.8
Min nTPM: 117.4
RHH5243_R3615
117.4
RHH5272_R3644
146.8
Terminal effector memory CD8 T-cell nTPM: 89.5
Samples: 4
Max nTPM: 107.5
Min nTPM: 65.7
RHH5232_R3604
86.6
RHH5204_R3575
65.7
RHH5261_R3633
98.0
RHH5296_R3662
107.5
Vd2 gdTCR nTPM: 162.8
Samples: 4
Max nTPM: 219.0
Min nTPM: 84.7
RHH5234_R3606
201.9
RHH5206_R3577
84.7
RHH5263_R3635
219.0
RHH5298_R3664
145.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
