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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
235.4
nTPM
FANTOM5:
741.4
Scaled Tags Per Million
Pig:
331.9
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
235.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 112.6
2188
Female, age 91, both hemispheres
123.7
2090
Male, age 80, both hemispheres
113.5
2301
Female, age 85, both hemispheres
107.8
1984
Male, age 76, both hemispheres
105.4
Dorsal cochlear nucleus nTPM: 117.4
2187
Female, age 91, both hemispheres
155.2
2370
Male, age 61, both hemispheres
136.4
2058
Male, age 76, both hemispheres
114.0
2802
Male, age 74, right hemisphere
95.8
2378
Male, age 80, both hemispheres
85.6
Dorsal tegmental nucleus nTPM: 138.3
2358
Male, age 61, both hemispheres
174.9
2083
Male, age 80, both hemispheres
146.3
2326
Male, age 74, both hemispheres
118.4
1936
Male, age 76, left hemisphere
113.6
Dorsolateral tegmental area nTPM: 129.0
2751
Female, age 85, both hemispheres
145.0
2654
Male, age 80, both hemispheres
144.6
2141
Male, age 76, both hemispheres
128.1
2337
Male, age 61, both hemispheres
114.3
2360
Male, age 74, both hemispheres
113.0
Kolliker-Fuse nucleus nTPM: 152.5
2163
Male, age 80, both hemispheres
192.4
2793
Female, age 91, left hemisphere
138.3
2315
Male, age 76, right hemisphere
126.7
Lateral lemniscal nuclei nTPM: 135.9
2169
Male, age 76, both hemispheres
163.5
2036
Male, age 80, both hemispheres
153.9
2453
Male, age 74, right hemisphere
133.1
2320
Female, age 91, left hemisphere
117.6
2746
Female, age 85, left hemisphere
111.3
Lateral parabrachial nucleus nTPM: 126.9
2139
Female, age 85, right hemisphere
130.4
2790
Male, age 61, both hemispheres
130.3
2013
Male, age 80, both hemispheres
129.6
2792
Male, age 76, both hemispheres
117.3
Lateral vestibular nucleus nTPM: 138.9
2184
Male, age 76, both hemispheres
154.6
2311
Male, age 80, both hemispheres
123.1
Locus coeruleus nTPM: 235.4
2123
Female, age 91, both hemispheres
286.7
2014
Male, age 55, unknown
281.7
2720
Male, age 74, both hemispheres
249.0
2317
Female, age 72, unknown
227.3
2788
Male, age 74, unknown
216.7
1980
Male, age 76, both hemispheres
195.3
2162
Male, age 80, both hemispheres
191.3
Medial parabrachial nucleus nTPM: 144.7
2170
Female, age 91, both hemispheres
193.5
2854
Male, age 80, both hemispheres
142.6
2156
Male, age 61, both hemispheres
139.0
2786
Male, age 76, both hemispheres
129.3
2463
Female, age 85, right hemisphere
119.1
Medial periolivary nuclei nTPM: 144.8
2063
Male, age 76, both hemispheres
186.6
2791
Male, age 74, right hemisphere
167.0
2171
Female, age 85, both hemispheres
142.8
2081
Male, age 80, both hemispheres
123.1
2458
Female, age 91, both hemispheres
104.5
Motor facial nucleus nTPM: 133.8
2062
Male, age 76, both hemispheres
189.6
2365
Male, age 74, right hemisphere
153.1
2327
Male, age 80, both hemispheres
122.1
2697
Female, age 85, both hemispheres
118.8
2126
Male, age 61, both hemispheres
113.5
2795
Female, age 91, both hemispheres
105.5
Motor trigeminal nucleus nTPM: 127.3
2335
Male, age 61, both hemispheres
142.3
2560
Male, age 74, both hemispheres
131.7
2079
Male, age 80, both hemispheres
123.1
2309
Male, age 76, both hemispheres
120.4
2321
Female, age 91, both hemispheres
119.2
Nuclei of the trapezoid body nTPM: 157.3
2159
Male, age 61, both hemispheres
240.2
1983
Male, age 76, both hemispheres
182.0
2735
Female, age 85, both hemispheres
145.5
2166
Male, age 80, both hemispheres
125.5
2368
Female, age 91, both hemispheres
93.6
Nucleus raphe magnus nTPM: 161.5
2160
Male, age 61, both hemispheres
224.0
2455
Male, age 74, both hemispheres
189.6
2051
Male, age 76, both hemispheres
164.7
2172
Female, age 85, both hemispheres
154.9
2328
Male, age 80, both hemispheres
128.1
2459
Female, age 91, both hemispheres
107.6
Paramedian reticular nucleus nTPM: 159.5
2050
Female, age 85, both hemispheres
178.8
2057
Male, age 80, both hemispheres
171.0
2313
Male, age 61, both hemispheres
160.9
2052
Male, age 76, both hemispheres
127.1
Pedunculopontine tegmental nucleus nTPM: 154.7
2334
Male, age 80, both hemispheres
166.1
2338
Male, age 61, both hemispheres
150.1
1921
Female, age 85, both hemispheres
148.1
Pontine nuclei nTPM: 157.4
1863
Male, age 55, unknown
191.1
2787
Female, age 85, both hemispheres
174.0
2109
Female, age 72, unknown
170.1
1968
Male, age 76, left hemisphere
165.0
2727
Male, age 61, right hemisphere
161.7
2454
Male, age 74, left hemisphere
158.8
2319
Female, age 91, both hemispheres
120.2
2115
Male, age 80, left hemisphere
118.0
Pontine raphe nucleus nTPM: 154.5
2122
Female, age 85, midline
157.4
2853
Male, age 76, midline
151.6
Posteroventral cochlear nucleus nTPM: 120.5
2752
Female, age 85, both hemispheres
143.8
2070
Male, age 76, both hemispheres
127.0
2341
Male, age 80, both hemispheres
114.3
2135
Female, age 91, both hemispheres
109.0
2371
Male, age 61, both hemispheres
108.2
Principal sensory trigeminal nucleus nTPM: 153.0
2158
Male, age 61, both hemispheres
199.2
2324
Male, age 76, both hemispheres
146.1
2008
Male, age 80, left hemisphere
140.0
2367
Female, age 91, left hemisphere
126.6
Reticular pontine nucleus, caudal nTPM: 130.8
2092
Male, age 76, both hemispheres
156.1
2559
Male, age 74, both hemispheres
142.3
2332
Male, age 80, right hemisphere
121.8
2457
Female, age 91, both hemispheres
102.9
Reticular pontine nucleus, oral nTPM: 138.2
2361
Male, age 74, both hemispheres
161.5
1939
Male, age 80, both hemispheres
153.8
2012
Female, age 85, both hemispheres
143.7
2167
Male, age 76, both hemispheres
130.7
2366
Female, age 91, both hemispheres
101.3
Reticulotegmental nucleus nTPM: 132.7
2325
Male, age 76, both hemispheres
159.8
2333
Male, age 80, both hemispheres
128.0
2322
Female, age 91, both hemispheres
124.2
2452
Male, age 74, both hemispheres
118.8
Spinal trigeminal nucleus, oral nTPM: 140.1
2164
Male, age 80, both hemispheres
155.9
2737
Female, age 85, both hemispheres
147.2
1978
Male, age 76, both hemispheres
117.3
Subcoeruleus area nTPM: 147.5
2323
Female, age 91, left hemisphere
182.6
1958
Male, age 80, both hemispheres
152.6
2089
Male, age 76, left hemisphere
139.9
2451
Male, age 74, both hemispheres
133.0
2369
Female, age 85, left hemisphere
129.6
Superior olive nTPM: 142.4
2364
Male, age 74, right hemisphere
183.1
2020
Male, age 76, both hemispheres
149.8
1875
Female, age 85, both hemispheres
146.9
2329
Male, age 80, right hemisphere
118.6
2561
Female, age 91, both hemispheres
113.6
Ventral periolivary nuclei nTPM: 139.8
2023
Male, age 76, both hemispheres
153.0
2130
Female, age 85, both hemispheres
148.9
2165
Male, age 80, both hemispheres
141.7
2794
Female, age 91, left hemisphere
115.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 140.1
2359
Male, age 61, both hemispheres
166.7
1959
Male, age 76, both hemispheres
155.0
2449
Male, age 74, both hemispheres
154.5
2840
Female, age 85, both hemispheres
143.0
2161
Male, age 80, both hemispheres
128.3
2456
Female, age 91, both hemispheres
93.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
