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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
219.1
nTPM
Monaco:
288.2
nTPM
Schmiedel:
254.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
219.1
HPA sample
nTPM
gdT-cell nTPM: 187.7
Samples: 6
Max nTPM: 277.9
Min nTPM: 91.1
P10809_1007
264.9
P10809_1022
277.9
P10809_1041
91.1
P10809_1060
98.3
P10809_1077
135.5
P10809_1098
258.6
MAIT T-cell nTPM: 219.1
Samples: 6
Max nTPM: 342.7
Min nTPM: 108.3
P10809_1006
342.7
P10809_1024
310.1
P10809_1043
108.3
P10809_1062
155.7
P10809_1083
120.8
P10809_1097
276.8
Memory CD4 T-cell nTPM: 152.8
Samples: 6
Max nTPM: 239.1
Min nTPM: 75.0
P10809_1014
225.6
P10809_1026
169.5
P10809_1045
75.0
P10809_1064
112.2
P10809_1086
95.3
P10809_1113
239.1
Memory CD8 T-cell nTPM: 188.7
Samples: 5
Max nTPM: 292.5
Min nTPM: 82.2
P10809_1012
292.5
P10809_1027
218.0
P10809_1046
82.2
P10809_1065
114.8
P10809_1111
236.2
Naive CD4 T-cell nTPM: 143.5
Samples: 6
Max nTPM: 220.6
Min nTPM: 55.2
P10809_1015
216.6
P10809_1030
152.6
P10809_1049
55.2
P10809_1068
129.0
P10809_1085
87.1
P10809_1112
220.6
Naive CD8 T-cell nTPM: 163.9
Samples: 6
Max nTPM: 233.1
Min nTPM: 54.7
P10809_1016
233.1
P10809_1031
233.1
P10809_1050
54.7
P10809_1069
141.9
P10809_1087
118.2
P10809_1110
202.5
T-reg nTPM: 181.3
Samples: 6
Max nTPM: 283.6
Min nTPM: 94.2
P10809_1018
283.6
P10809_1037
223.7
P10809_1056
94.2
P10809_1075
105.8
P10809_1094
141.3
P10809_1106
239.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
288.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 194.3
Samples: 4
Max nTPM: 242.5
Min nTPM: 108.2
RHH5202_R3573
108.2
RHH5230_R3602
242.5
RHH5259_R3631
200.7
RHH5288_R3660
225.6
Effector memory CD8 T-cell nTPM: 258.4
Samples: 4
Max nTPM: 323.1
Min nTPM: 169.7
RHH5203_R3574
169.7
RHH5231_R3603
248.5
RHH5260_R3632
292.4
RHH5289_R3661
323.1
MAIT T-cell nTPM: 236.9
Samples: 4
Max nTPM: 275.7
Min nTPM: 140.2
RHH5233_R3605
268.3
RHH5205_R3576
140.2
RHH5262_R3634
275.7
RHH5297_R3663
263.3
Memory CD4 T-cell TFH nTPM: 226.0
Samples: 4
Max nTPM: 276.5
Min nTPM: 124.0
RHH5300_R3666
276.5
RHH5236_R3608
227.4
RHH5265_R3637
276.2
RHH5208_R3579
124.0
Memory CD4 T-cell Th1 nTPM: 215.6
Samples: 4
Max nTPM: 344.9
Min nTPM: 42.6
RHH5210_R3581
42.6
RHH5302_R3668
277.4
RHH5238_R3610
197.3
RHH5267_R3639
344.9
Memory CD4 T-cell Th1/Th17 nTPM: 242.0
Samples: 4
Max nTPM: 323.0
Min nTPM: 122.0
RHH5303_R3669
323.0
RHH5211_R3582
122.0
RHH5239_R3611
244.2
RHH5268_R3640
278.9
Memory CD4 T-cell Th17 nTPM: 256.3
Samples: 4
Max nTPM: 331.8
Min nTPM: 65.0
RHH5304_R3670
312.0
RHH5212_R3583
65.0
RHH5240_R3612
331.8
RHH5269_R3641
316.3
Memory CD4 T-cell Th2 nTPM: 248.0
Samples: 4
Max nTPM: 324.6
Min nTPM: 83.4
RHH5305_R3671
324.6
RHH5213_R3584
83.4
RHH5241_R3613
310.5
RHH5270_R3642
273.6
Naive CD4 T-cell nTPM: 188.3
Samples: 4
Max nTPM: 281.0
Min nTPM: 60.5
RHH5306_R3672
206.5
RHH5214_R3585
60.5
RHH5242_R3614
205.1
RHH5271_R3643
281.0
Naive CD8 T-cell nTPM: 182.6
Samples: 4
Max nTPM: 221.9
Min nTPM: 90.6
RHH5201_R3572
90.6
RHH5229_R3601
199.6
RHH5258_R3630
221.9
RHH5287_R3659
218.4
Non-Vd2 gdTCR nTPM: 247.5
Samples: 4
Max nTPM: 338.8
Min nTPM: 144.6
RHH5235_R3607
249.3
RHH5264_R3636
257.3
RHH5207_R3578
144.6
RHH5299_R3665
338.8
T-reg nTPM: 259.3
Samples: 4
Max nTPM: 316.3
Min nTPM: 103.8
RHH5301_R3667
316.3
RHH5237_R3609
304.8
RHH5266_R3638
312.3
RHH5209_R3580
103.8
Terminal effector memory CD4 T-cell nTPM: 288.3
Samples: 2
Max nTPM: 307.6
Min nTPM: 268.9
RHH5243_R3615
268.9
RHH5272_R3644
307.6
Terminal effector memory CD8 T-cell nTPM: 276.7
Samples: 4
Max nTPM: 343.7
Min nTPM: 111.4
RHH5232_R3604
316.6
RHH5204_R3575
111.4
RHH5261_R3633
335.2
RHH5296_R3662
343.7
Vd2 gdTCR nTPM: 188.9
Samples: 4
Max nTPM: 254.8
Min nTPM: 53.9
RHH5234_R3606
211.9
RHH5206_R3577
53.9
RHH5263_R3635
254.8
RHH5298_R3664
235.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.