HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:12.8 nTPM
HPA Brain:18.5 nTPM
GTEx:12.8 nTPM
FANTOM5:17.2 Scaled Tags Per Million
Pig:37.8 nTPM
Mouse:22.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036335Antibody HPA036336Antibody HPA061466
Glial cells MediumMediumLow
Neuronal cells HighMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.5
Sample id Sample description nTPM
Hippocampus
nTPM: 14.6
2621 Female, age 67, right hemisphere 16.4
1898 Male, age 80, left hemisphere 16.3
1855 Male, age 76, left hemisphere 15.2
2148 Female, age 91, left hemisphere 14.6
1911 Female, age 85, right hemisphere 13.4
2529 Female, age 94, left hemisphere 11.9
Dentate gyrus
nTPM: 15.5
2010 Male, age 76, both hemispheres 16.0
2246 Female, age 85, both hemispheres 16.0
2528 Male, age 74, both hemispheres 16.0
1927 Female, age 91, both hemispheres 15.7
2531 Female, age 67, both hemispheres 15.4
2530 Female, age 94, left hemisphere 14.1
Entorhinal gyrus
nTPM: 15.6
2764 Male, age 80, right hemisphere 17.3
1938 Female, age 85, left hemisphere 16.7
1787 Male, age 76, left hemisphere 16.4
2117 Female, age 91, right hemisphere 15.7
2686 Male, age 75, right hemisphere 14.5
2613 Female, age 94, left hemisphere 13.1
Hippocampus, CA1
nTPM: 15.0
2749 Male, age 80, left hemisphere 16.4
2045 Male, age 76, both hemispheres 15.6
2527 Male, age 74, both hemispheres 15.0
1873 Female, age 85, both hemispheres 14.0
2082 Female, age 91, right hemisphere 14.0
Hippocampus, CA2
nTPM: 15.9
2249 Male, age 74, both hemispheres 17.3
1940 Female, age 85, left hemisphere 16.4
1892 Male, age 76, both hemispheres 16.3
2437 Female, age 94, left hemisphere 16.0
1963 Male, age 80, left hemisphere 15.1
2113 Female, age 91, right hemisphere 14.4
Hippocampus, CA3
nTPM: 14.9
2436 Male, age 74, both hemispheres 17.1
2620 Female, age 94, left hemisphere 16.2
1891 Female, age 85, both hemispheres 15.7
1867 Male, age 76, both hemispheres 14.9
2137 Male, age 80, left hemisphere 14.6
2861 Female, age 67, both hemispheres 11.1
Parahippocampal cortex
nTPM: 16.0
1850 Male, age 80, both hemispheres 20.3
2693 Female, age 94, both hemispheres 18.0
2532 Female, age 72, left hemisphere 17.9
1990 Female, age 91, right hemisphere 16.5
2245 Female, age 91, both hemispheres 16.2
2250 Female, age 67, right hemisphere 15.3
1933 Female, age 85, both hemispheres 15.1
2692 Male, age 74, both hemispheres 14.6
2018 Male, age 76, both hemispheres 13.9
2622 Female, age 67, right hemisphere 12.5
Perirhinal gyrus
nTPM: 18.5
1794 Male, age 80, right hemisphere 21.1
1847 Female, age 91, left hemisphere 19.4
1841 Female, age 85, right hemisphere 17.7
2848 Male, age 76, right hemisphere 17.3
2521 Female, age 94, right hemisphere 16.8
Subiculum
nTPM: 15.3
2438 Female, age 94, left hemisphere 18.0
1977 Female, age 85, both hemispheres 16.8
2619 Male, age 74, both hemispheres 15.6
1901 Male, age 80, both hemispheres 14.3
2042 Male, age 76, both hemispheres 13.6
2729 Female, age 91, right hemisphere 13.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 20.7
Min nTPM: 7.7
Std nTPM: 2.3
Median nTPM: 12.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 20.7
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 20.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 19.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 19.0
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 17.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 17.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 17.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 17.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 16.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 16.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 16.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.2
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 8.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.8
Pig sample Sample description nTPM
Subiculum
nTPM: 36.4
Samples: 4

Max nTPM: 38.6
Min nTPM: 33.7
Sample A Female 34.6
Sample B Female 38.5
Sample C Male 38.6
Sample D Male 33.7
Dorsal hippocampus
nTPM: 37.8
Samples: 4

Max nTPM: 42.8
Min nTPM: 29.7
Sample A Female 37.7
Sample B Female 41.1
Sample C Male 42.8
Sample D Male 29.7
Entorhinal cortex
nTPM: 31.2
Samples: 4

Max nTPM: 35.3
Min nTPM: 27.4
Sample A Female 27.4
Sample B Female 35.3
Sample C Male 34.1
Sample D Male 27.8
Ventral hippocampus
nTPM: 36.5
Samples: 4

Max nTPM: 42.4
Min nTPM: 33.0
Sample A Female 33.0
Sample B Female 33.2
Sample C Male 42.4
Sample D Male 37.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 23.6
Min nTPM: 17.6
Sample A Male 17.6
Sample B Male 18.6
Sample C Female 23.6
Sample D Female 20.5
Hippocampal formation
nTPM: 22.0
Samples: 4

Max nTPM: 25.5
Min nTPM: 19.9
Sample A Male 25.5
Sample B Male 19.9
Sample C Female 21.3
Sample D Female 21.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69782252 Antisense, RP_050505_02_F03, Mouse strain C57BL/6J (56 days, male) 0.0

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