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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
522.9
nTPM
Monaco:
565.4
nTPM
Schmiedel:
43.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
522.9
HPA sample
nTPM
gdT-cell nTPM: 260.8
Samples: 6
Max nTPM: 328.8
Min nTPM: 147.5
P10809_1007
147.5
P10809_1022
317.5
P10809_1041
265.1
P10809_1060
328.8
P10809_1077
215.9
P10809_1098
289.9
MAIT T-cell nTPM: 337.5
Samples: 6
Max nTPM: 456.7
Min nTPM: 257.2
P10809_1006
272.7
P10809_1024
381.1
P10809_1043
299.0
P10809_1062
456.7
P10809_1083
257.2
P10809_1097
358.3
Memory CD4 T-cell nTPM: 437.3
Samples: 6
Max nTPM: 560.0
Min nTPM: 364.7
P10809_1014
382.1
P10809_1026
381.8
P10809_1045
560.0
P10809_1064
364.7
P10809_1086
380.1
P10809_1113
554.8
Memory CD8 T-cell nTPM: 333.8
Samples: 5
Max nTPM: 417.5
Min nTPM: 285.0
P10809_1012
287.6
P10809_1027
329.1
P10809_1046
349.9
P10809_1065
285.0
P10809_1111
417.5
Naive CD4 T-cell nTPM: 522.9
Samples: 6
Max nTPM: 696.1
Min nTPM: 431.1
P10809_1015
431.1
P10809_1030
474.8
P10809_1049
696.1
P10809_1068
504.4
P10809_1085
512.6
P10809_1112
518.2
Naive CD8 T-cell nTPM: 281.3
Samples: 6
Max nTPM: 309.0
Min nTPM: 258.2
P10809_1016
258.2
P10809_1031
276.0
P10809_1050
283.1
P10809_1069
264.9
P10809_1087
296.3
P10809_1110
309.0
T-reg nTPM: 177.3
Samples: 6
Max nTPM: 230.3
Min nTPM: 137.6
P10809_1018
137.6
P10809_1037
189.7
P10809_1056
230.3
P10809_1075
149.6
P10809_1094
180.4
P10809_1106
176.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
565.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 335.8
Samples: 4
Max nTPM: 379.8
Min nTPM: 242.9
RHH5202_R3573
379.8
RHH5230_R3602
242.9
RHH5259_R3631
349.5
RHH5288_R3660
371.1
Effector memory CD8 T-cell nTPM: 335.1
Samples: 4
Max nTPM: 440.4
Min nTPM: 258.7
RHH5203_R3574
440.4
RHH5231_R3603
258.7
RHH5260_R3632
279.3
RHH5289_R3661
361.8
MAIT T-cell nTPM: 360.4
Samples: 4
Max nTPM: 448.2
Min nTPM: 300.0
RHH5233_R3605
367.1
RHH5205_R3576
300.0
RHH5262_R3634
448.2
RHH5297_R3663
326.2
Memory CD4 T-cell TFH nTPM: 565.4
Samples: 4
Max nTPM: 692.1
Min nTPM: 475.1
RHH5300_R3666
507.2
RHH5236_R3608
475.1
RHH5265_R3637
692.1
RHH5208_R3579
587.2
Memory CD4 T-cell Th1 nTPM: 445.9
Samples: 4
Max nTPM: 553.0
Min nTPM: 278.1
RHH5210_R3581
431.3
RHH5302_R3668
553.0
RHH5238_R3610
278.1
RHH5267_R3639
521.1
Memory CD4 T-cell Th1/Th17 nTPM: 429.2
Samples: 4
Max nTPM: 535.2
Min nTPM: 254.9
RHH5303_R3669
535.2
RHH5211_R3582
418.0
RHH5239_R3611
254.9
RHH5268_R3640
508.7
Memory CD4 T-cell Th17 nTPM: 395.1
Samples: 4
Max nTPM: 485.8
Min nTPM: 295.8
RHH5304_R3670
456.8
RHH5212_R3583
341.8
RHH5240_R3612
295.8
RHH5269_R3641
485.8
Memory CD4 T-cell Th2 nTPM: 449.5
Samples: 4
Max nTPM: 476.1
Min nTPM: 430.1
RHH5305_R3671
435.4
RHH5213_R3584
430.1
RHH5241_R3613
456.3
RHH5270_R3642
476.1
Naive CD4 T-cell nTPM: 493.9
Samples: 4
Max nTPM: 565.4
Min nTPM: 426.6
RHH5306_R3672
458.1
RHH5214_R3585
525.4
RHH5242_R3614
426.6
RHH5271_R3643
565.4
Naive CD8 T-cell nTPM: 318.9
Samples: 4
Max nTPM: 411.4
Min nTPM: 140.3
RHH5201_R3572
411.4
RHH5229_R3601
140.3
RHH5258_R3630
391.7
RHH5287_R3659
332.3
Non-Vd2 gdTCR nTPM: 169.7
Samples: 4
Max nTPM: 202.4
Min nTPM: 102.9
RHH5235_R3607
176.0
RHH5264_R3636
202.4
RHH5207_R3578
197.4
RHH5299_R3665
102.9
T-reg nTPM: 376.6
Samples: 4
Max nTPM: 437.1
Min nTPM: 335.7
RHH5301_R3667
335.7
RHH5237_R3609
336.9
RHH5266_R3638
437.1
RHH5209_R3580
396.8
Terminal effector memory CD4 T-cell nTPM: 302.6
Samples: 2
Max nTPM: 423.1
Min nTPM: 182.1
RHH5243_R3615
182.1
RHH5272_R3644
423.1
Terminal effector memory CD8 T-cell nTPM: 218.2
Samples: 4
Max nTPM: 242.7
Min nTPM: 190.1
RHH5232_R3604
242.7
RHH5204_R3575
223.4
RHH5261_R3633
190.1
RHH5296_R3662
216.5
Vd2 gdTCR nTPM: 327.0
Samples: 4
Max nTPM: 394.0
Min nTPM: 236.0
RHH5234_R3606
329.8
RHH5206_R3577
236.0
RHH5263_R3635
394.0
RHH5298_R3664
348.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.