HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.1 nTPM
HPA Brain:41.9 nTPM
GTEx:19.1 nTPM
FANTOM5:21.5 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:19.5 nTPM
Allen mouse:7.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071290
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.9
Sample id Sample description nTPM
Hippocampus
nTPM: 41.9
2529 Female, age 94, left hemisphere 55.7
2148 Female, age 91, left hemisphere 47.5
1911 Female, age 85, right hemisphere 43.6
1898 Male, age 80, left hemisphere 40.2
2621 Female, age 67, right hemisphere 32.8
1855 Male, age 76, left hemisphere 31.3
Dentate gyrus
nTPM: 36.8
2531 Female, age 67, both hemispheres 49.2
2528 Male, age 74, both hemispheres 46.2
1927 Female, age 91, both hemispheres 34.4
2530 Female, age 94, left hemisphere 31.4
2246 Female, age 85, both hemispheres 31.2
2010 Male, age 76, both hemispheres 28.3
Entorhinal gyrus
nTPM: 21.1
2686 Male, age 75, right hemisphere 30.8
2764 Male, age 80, right hemisphere 27.7
2117 Female, age 91, right hemisphere 23.6
1787 Male, age 76, left hemisphere 17.6
1938 Female, age 85, left hemisphere 13.7
2613 Female, age 94, left hemisphere 13.5
Hippocampus, CA1
nTPM: 41.2
2527 Male, age 74, both hemispheres 48.5
2749 Male, age 80, left hemisphere 43.9
2045 Male, age 76, both hemispheres 39.9
1873 Female, age 85, both hemispheres 39.0
2082 Female, age 91, right hemisphere 34.7
Hippocampus, CA2
nTPM: 32.9
2437 Female, age 94, left hemisphere 40.1
2113 Female, age 91, right hemisphere 39.1
1963 Male, age 80, left hemisphere 38.0
2249 Male, age 74, both hemispheres 35.0
1892 Male, age 76, both hemispheres 28.8
1940 Female, age 85, left hemisphere 16.6
Hippocampus, CA3
nTPM: 41.0
2620 Female, age 94, left hemisphere 53.6
2137 Male, age 80, left hemisphere 49.2
2861 Female, age 67, both hemispheres 47.5
1867 Male, age 76, both hemispheres 33.1
2436 Male, age 74, both hemispheres 32.4
1891 Female, age 85, both hemispheres 30.0
Parahippocampal cortex
nTPM: 30.9
2622 Female, age 67, right hemisphere 57.3
2245 Female, age 91, both hemispheres 40.4
2018 Male, age 76, both hemispheres 35.0
2532 Female, age 72, left hemisphere 34.6
1850 Male, age 80, both hemispheres 27.8
2693 Female, age 94, both hemispheres 26.2
2250 Female, age 67, right hemisphere 25.8
1933 Female, age 85, both hemispheres 24.4
2692 Male, age 74, both hemispheres 19.1
1990 Female, age 91, right hemisphere 18.0
Perirhinal gyrus
nTPM: 28.2
1794 Male, age 80, right hemisphere 37.7
2521 Female, age 94, right hemisphere 34.2
2848 Male, age 76, right hemisphere 27.5
1841 Female, age 85, right hemisphere 21.8
1847 Female, age 91, left hemisphere 19.8
Subiculum
nTPM: 30.3
2729 Female, age 91, right hemisphere 47.2
1901 Male, age 80, both hemispheres 29.6
2042 Male, age 76, both hemispheres 27.4
2438 Female, age 94, left hemisphere 26.0
1977 Female, age 85, both hemispheres 25.7
2619 Male, age 74, both hemispheres 25.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.1
Samples: 197

Max nTPM: 78.2
Min nTPM: 2.6
Std nTPM: 10.2
Median nTPM: 16.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 78.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 54.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 47.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 46.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 44.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 44.3
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 42.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 41.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 41.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 40.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 39.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.5
FF:10169-103B7 60 years, female 24.9
FF:10153-102I9 76 years, female 18.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.2
Pig sample Sample description nTPM
Subiculum
nTPM: 21.2
Samples: 4

Max nTPM: 27.8
Min nTPM: 15.3
Sample A Female 25.4
Sample B Female 16.3
Sample C Male 27.8
Sample D Male 15.3
Dorsal hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 23.3
Min nTPM: 15.4
Sample A Female 20.7
Sample B Female 23.3
Sample C Male 15.4
Sample D Male 18.7
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 26.0
Min nTPM: 17.8
Sample A Female 21.9
Sample B Female 21.1
Sample C Male 26.0
Sample D Male 17.8
Ventral hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 39.0
Min nTPM: 20.9
Sample A Female 21.7
Sample B Female 27.2
Sample C Male 39.0
Sample D Male 20.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 23.2
Min nTPM: 17.9
Sample A Male 18.8
Sample B Male 17.9
Sample C Female 17.9
Sample D Female 23.2
Hippocampal formation
nTPM: 17.6
Samples: 4

Max nTPM: 19.7
Min nTPM: 14.9
Sample A Male 16.2
Sample B Male 19.4
Sample C Female 14.9
Sample D Female 19.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.1
71210550 Antisense, RP_050810_04_D08, Mouse strain C57BL/6J (56 days, male) 7.1
73615803 Antisense, RP_050810_04_D08, Mouse strain C57BL/6J (56 days, male) 6.0

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