HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.8 nTPM
HPA Brain:26.4 nTPM
GTEx:15.8 nTPM
FANTOM5:51.9 Scaled Tags Per Million
Pig:14.6 nTPM
Mouse:21.5 nTPM
Allen mouse:8.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.4
Sample id Sample description nTPM
Hippocampus
nTPM: 23.1
2148 Female, age 91, left hemisphere 25.1
2621 Female, age 67, right hemisphere 25.0
1898 Male, age 80, left hemisphere 23.8
1855 Male, age 76, left hemisphere 22.5
2529 Female, age 94, left hemisphere 21.8
1911 Female, age 85, right hemisphere 20.4
Dentate gyrus
nTPM: 24.0
2531 Female, age 67, both hemispheres 26.4
1927 Female, age 91, both hemispheres 24.6
2530 Female, age 94, left hemisphere 24.3
2010 Male, age 76, both hemispheres 23.3
2246 Female, age 85, both hemispheres 23.0
2528 Male, age 74, both hemispheres 22.6
Entorhinal gyrus
nTPM: 26.4
2764 Male, age 80, right hemisphere 29.8
1787 Male, age 76, left hemisphere 27.4
2613 Female, age 94, left hemisphere 27.2
2686 Male, age 75, right hemisphere 25.7
1938 Female, age 85, left hemisphere 25.1
2117 Female, age 91, right hemisphere 23.2
Hippocampus, CA1
nTPM: 23.1
2749 Male, age 80, left hemisphere 25.5
2527 Male, age 74, both hemispheres 23.2
1873 Female, age 85, both hemispheres 22.7
2082 Female, age 91, right hemisphere 22.3
2045 Male, age 76, both hemispheres 21.6
Hippocampus, CA2
nTPM: 23.4
2437 Female, age 94, left hemisphere 24.7
1892 Male, age 76, both hemispheres 24.6
1940 Female, age 85, left hemisphere 24.3
1963 Male, age 80, left hemisphere 22.8
2113 Female, age 91, right hemisphere 22.1
2249 Male, age 74, both hemispheres 22.0
Hippocampus, CA3
nTPM: 25.3
2620 Female, age 94, left hemisphere 29.3
2861 Female, age 67, both hemispheres 28.1
2436 Male, age 74, both hemispheres 27.2
1891 Female, age 85, both hemispheres 23.1
2137 Male, age 80, left hemisphere 22.6
1867 Male, age 76, both hemispheres 21.6
Parahippocampal cortex
nTPM: 25.4
2622 Female, age 67, right hemisphere 29.5
1850 Male, age 80, both hemispheres 26.2
2245 Female, age 91, both hemispheres 26.1
1990 Female, age 91, right hemisphere 25.7
1933 Female, age 85, both hemispheres 25.5
2532 Female, age 72, left hemisphere 25.0
2018 Male, age 76, both hemispheres 24.9
2692 Male, age 74, both hemispheres 24.3
2250 Female, age 67, right hemisphere 23.7
2693 Female, age 94, both hemispheres 23.1
Perirhinal gyrus
nTPM: 25.6
2848 Male, age 76, right hemisphere 28.8
1794 Male, age 80, right hemisphere 26.0
1847 Female, age 91, left hemisphere 25.5
1841 Female, age 85, right hemisphere 24.4
2521 Female, age 94, right hemisphere 23.1
Subiculum
nTPM: 23.3
1977 Female, age 85, both hemispheres 25.7
2619 Male, age 74, both hemispheres 25.7
2438 Female, age 94, left hemisphere 23.4
2042 Male, age 76, both hemispheres 22.2
2729 Female, age 91, right hemisphere 21.7
1901 Male, age 80, both hemispheres 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.8
Samples: 197

Max nTPM: 22.1
Min nTPM: 9.6
Std nTPM: 2.4
Median nTPM: 15.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 22.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 21.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 21.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 21.0
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 20.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 20.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 20.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 20.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 19.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 19.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.9
FF:10169-103B7 60 years, female 55.0
FF:10153-102I9 76 years, female 48.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.6
Pig sample Sample description nTPM
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 17.6
Min nTPM: 11.9
Sample A Female 17.6
Sample B Female 13.2
Sample C Male 12.5
Sample D Male 11.9
Dorsal hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 18.4
Min nTPM: 11.8
Sample A Female 18.4
Sample B Female 14.3
Sample C Male 11.8
Sample D Male 12.7
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 14.6
Min nTPM: 11.2
Sample A Female 14.6
Sample B Female 13.4
Sample C Male 13.7
Sample D Male 11.2
Ventral hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 18.1
Min nTPM: 12.2
Sample A Female 14.2
Sample B Female 12.2
Sample C Male 18.1
Sample D Male 13.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 21.3
Min nTPM: 19.0
Sample A Male 19.0
Sample B Male 21.3
Sample C Female 19.8
Sample D Female 19.6
Hippocampal formation
nTPM: 21.5
Samples: 4

Max nTPM: 23.8
Min nTPM: 18.7
Sample A Male 23.8
Sample B Male 22.5
Sample C Female 21.0
Sample D Female 18.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.7
227159 Antisense, RP_040604_01_G09, Mouse strain C57BL/6J (56 days, male) 14.2
68203484 Antisense, RP_041208_01_C04, Mouse strain C57BL/6J (56 days, male) 3.2

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