PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:34.2 nTPM
FANTOM5:37.7 Scaled Tags Per Million
Pig:25.5 nTPM
Mouse:6.3 nTPM
Allen mouse:0.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 34.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 27.1
2301 Female, age 85, both hemispheres 29.0
1984 Male, age 76, both hemispheres 27.2
2188 Female, age 91, both hemispheres 27.2
2090 Male, age 80, both hemispheres 24.8
Area postrema
nTPM: 28.4
2054 Male, age 76, both hemispheres 40.5
2306 Male, age 80, both hemispheres 24.3
2799 Male, age 61, both hemispheres 20.4
Dorsal cochlear nucleus
nTPM: 26.8
2058 Male, age 76, both hemispheres 28.5
2378 Male, age 80, both hemispheres 27.3
2187 Female, age 91, both hemispheres 27.1
2370 Male, age 61, both hemispheres 27.0
2802 Male, age 74, right hemisphere 23.9
Dorsal medullary reticular nucleus
nTPM: 26.5
2040 Female, age 85, both hemispheres 29.7
2088 Male, age 76, both hemispheres 26.0
2373 Male, age 61, both hemispheres 23.9
Dorsal motor vagal complex
nTPM: 28.4
2813 Female, age 72, unknown 33.6
2185 Male, age 76, both hemispheres 33.3
2807 Female, age 85, both hemispheres 30.9
2133 Female, age 91, both hemispheres 28.8
2000 Male, age 74, unknown 27.0
2643 Male, age 74, both hemispheres 26.1
2844 Male, age 55, unknown 24.0
2797 Male, age 61, both hemispheres 23.2
Dorsal tegmental nucleus
nTPM: 28.3
2358 Male, age 61, both hemispheres 33.4
1936 Male, age 76, left hemisphere 28.3
2083 Male, age 80, both hemispheres 26.3
2326 Male, age 74, both hemispheres 25.4
Dorsolateral tegmental area
nTPM: 27.9
2141 Male, age 76, both hemispheres 31.3
2751 Female, age 85, both hemispheres 28.8
2360 Male, age 74, both hemispheres 27.2
2654 Male, age 80, both hemispheres 27.2
2337 Male, age 61, both hemispheres 24.7
Gigantocellular reticular nuclei, medullary
nTPM: 25.0
2310 Male, age 80, both hemispheres 27.5
1876 Female, age 85, both hemispheres 26.6
2022 Male, age 76, right hemisphere 26.3
2314 Male, age 61, both hemispheres 25.5
2387 Female, age 91, both hemispheres 23.0
2462 Male, age 74, both hemispheres 21.3
Gigantocellular reticular nuclei, pars
nTPM: 27.0
2336 Male, age 61, both hemispheres 34.0
2330 Male, age 80, both hemispheres 27.0
2084 Female, age 85, both hemispheres 26.8
2706 Male, age 80, both hemispheres 24.7
2168 Male, age 76, both hemispheres 22.8
Inferior olive
nTPM: 25.5
2628 Female, age 91, both hemispheres 28.7
2085 Female, age 85, both hemispheres 27.5
2563 Male, age 74, both hemispheres 24.4
2379 Male, age 80, both hemispheres 24.1
2178 Male, age 61, both hemispheres 22.7
Kolliker-Fuse nucleus
nTPM: 34.2
2315 Male, age 76, right hemisphere 41.0
2163 Male, age 80, both hemispheres 31.5
2793 Female, age 91, left hemisphere 30.0
Lateral lemniscal nuclei
nTPM: 25.7
2036 Male, age 80, both hemispheres 29.3
2453 Male, age 74, right hemisphere 25.8
2320 Female, age 91, left hemisphere 25.0
2746 Female, age 85, left hemisphere 24.9
2169 Male, age 76, both hemispheres 23.5
Lateral medullary reticular nucleus
nTPM: 27.8
2044 Male, age 76, both hemispheres 30.0
2374 Male, age 61, both hemispheres 29.2
2305 Male, age 74, both hemispheres 28.1
2804 Female, age 91, both hemispheres 27.2
2190 Female, age 85, both hemispheres 26.8
2852 Male, age 80, both hemispheres 25.5
Lateral parabrachial nucleus
nTPM: 29.2
2792 Male, age 76, both hemispheres 39.8
2139 Female, age 85, right hemisphere 27.7
2790 Male, age 61, both hemispheres 24.9
2013 Male, age 80, both hemispheres 24.2
Lateral vestibular nucleus
nTPM: 28.4
2184 Male, age 76, both hemispheres 29.6
2311 Male, age 80, both hemispheres 27.2
Locus coeruleus
nTPM: 30.7
2014 Male, age 55, unknown 34.6
2720 Male, age 74, both hemispheres 34.5
2788 Male, age 74, unknown 30.8
2123 Female, age 91, both hemispheres 30.7
2162 Male, age 80, both hemispheres 30.0
1980 Male, age 76, both hemispheres 29.4
2317 Female, age 72, unknown 25.0
Medial olivary nucleus
nTPM: 27.0
2851 Male, age 80, both hemispheres 31.9
1962 Male, age 76, both hemispheres 29.5
2138 Female, age 91, both hemispheres 23.4
1943 Male, age 61, both hemispheres 23.2
Medial parabrachial nucleus
nTPM: 29.6
2854 Male, age 80, both hemispheres 32.3
2156 Male, age 61, both hemispheres 30.6
2786 Male, age 76, both hemispheres 29.7
2170 Female, age 91, both hemispheres 28.0
2463 Female, age 85, right hemisphere 27.3
Medial periolivary nuclei
nTPM: 24.5
2458 Female, age 91, both hemispheres 25.8
2081 Male, age 80, both hemispheres 25.3
2171 Female, age 85, both hemispheres 25.2
2791 Male, age 74, right hemisphere 25.1
2063 Male, age 76, both hemispheres 21.0
Medial vestibular nucleus
nTPM: 29.9
2624 Male, age 61, both hemispheres 34.9
2134 Male, age 76, both hemispheres 32.4
2801 Male, age 74, both hemispheres 30.8
2803 Female, age 91, both hemispheres 29.5
2093 Male, age 80, both hemispheres 26.1
2743 Female, age 85, both hemispheres 25.9
Motor facial nucleus
nTPM: 25.4
2697 Female, age 85, both hemispheres 28.6
2327 Male, age 80, both hemispheres 27.3
2365 Male, age 74, right hemisphere 26.9
2126 Male, age 61, both hemispheres 24.4
2795 Female, age 91, both hemispheres 23.1
2062 Male, age 76, both hemispheres 22.2
Motor hypoglossal nucleus
nTPM: 33.0
2461 Male, age 61, both hemispheres 42.8
2277 Male, age 76, both hemispheres 36.3
2182 Male, age 80, both hemispheres 32.0
2132 Female, age 85, both hemispheres 29.4
2125 Female, age 91, both hemispheres 24.3
Motor trigeminal nucleus
nTPM: 26.9
2335 Male, age 61, both hemispheres 30.3
2321 Female, age 91, both hemispheres 28.0
2560 Male, age 74, both hemispheres 26.7
2309 Male, age 76, both hemispheres 25.3
2079 Male, age 80, both hemispheres 24.2
Nuclei of the trapezoid body
nTPM: 24.9
2368 Female, age 91, both hemispheres 27.0
2735 Female, age 85, both hemispheres 26.6
2159 Male, age 61, both hemispheres 24.1
2166 Male, age 80, both hemispheres 24.1
1983 Male, age 76, both hemispheres 22.6
Nucleus ambiguus
nTPM: 30.2
2071 Male, age 76, both hemispheres 33.5
2096 Female, age 85, both hemispheres 26.9
Nucleus cuneatus
nTPM: 25.5
2100 Male, age 76, both hemispheres 29.5
2808 Female, age 85, both hemispheres 27.5
2376 Male, age 61, both hemispheres 26.2
2381 Male, age 80, both hemispheres 25.8
2131 Male, age 76, both hemispheres 25.6
2564 Male, age 74, both hemispheres 23.9
2380 Male, age 80, both hemispheres 23.7
2562 Male, age 61, both hemispheres 23.4
2805 Female, age 91, both hemispheres 23.4
Nucleus gracilis
nTPM: 27.4
2627 Male, age 74, both hemispheres 31.1
2382 Male, age 80, both hemispheres 27.3
2299 Female, age 85, both hemispheres 23.9
Nucleus raphe magnus
nTPM: 26.3
2172 Female, age 85, both hemispheres 29.0
2160 Male, age 61, both hemispheres 28.2
2328 Male, age 80, both hemispheres 27.5
2455 Male, age 74, both hemispheres 25.3
2459 Female, age 91, both hemispheres 24.8
2051 Male, age 76, both hemispheres 22.9
Nucleus raphe obscurus
nTPM: 29.9
2142 Male, age 76, midline 34.5
2845 Female, age 85, midline 28.2
2800 Male, age 61, midline 26.9
Nucleus raphe pallidus
nTPM: 28.0
2145 Male, age 76, midline 31.4
2183 Male, age 80, midline 28.5
1924 Male, age 61, midline 23.9
Nucleus tractus solitarii
nTPM: 30.0
2144 Female, age 91, right hemisphere 38.4
2307 Male, age 80, both hemispheres 27.7
2656 Male, age 76, both hemispheres 27.7
2191 Female, age 85, both hemispheres 26.2
Paramedian reticular nucleus
nTPM: 29.3
2052 Male, age 76, both hemispheres 33.4
2313 Male, age 61, both hemispheres 31.2
2050 Female, age 85, both hemispheres 27.9
2057 Male, age 80, both hemispheres 24.6
Parvicellular reticular nuclei
nTPM: 27.1
2119 Male, age 80, both hemispheres 28.9
2095 Male, age 76, both hemispheres 26.5
2558 Male, age 74, both hemispheres 25.8
Parvicellular reticular nuclei, medullary
nTPM: 27.2
2189 Female, age 91, both hemispheres 28.3
2091 Female, age 85, both hemispheres 27.4
2181 Male, age 80, left hemisphere 25.7
Pedunculopontine tegmental nucleus
nTPM: 26.2
2334 Male, age 80, both hemispheres 28.2
1921 Female, age 85, both hemispheres 25.3
2338 Male, age 61, both hemispheres 25.1
Peritrigeminal nucleus
nTPM: 27.9
2136 Male, age 76, both hemispheres 31.8
2179 Male, age 61, both hemispheres 28.1
2067 Female, age 85, both hemispheres 23.8
Pontine nuclei
nTPM: 24.7
2787 Female, age 85, both hemispheres 27.7
2319 Female, age 91, both hemispheres 27.0
2454 Male, age 74, left hemisphere 25.6
2115 Male, age 80, left hemisphere 25.2
1863 Male, age 55, unknown 24.8
2727 Male, age 61, right hemisphere 24.0
2109 Female, age 72, unknown 23.3
1968 Male, age 76, left hemisphere 20.3
Pontine raphe nucleus
nTPM: 26.7
2122 Female, age 85, midline 27.4
2853 Male, age 76, midline 26.0
Posteroventral cochlear nucleus
nTPM: 26.2
2371 Male, age 61, both hemispheres 27.8
2070 Male, age 76, both hemispheres 27.6
2341 Male, age 80, both hemispheres 26.5
2135 Female, age 91, both hemispheres 24.7
2752 Female, age 85, both hemispheres 24.5
Prepositus hypoglossal nucleus
nTPM: 25.8
2086 Male, age 80, both hemispheres 26.5
2855 Female, age 85, right hemisphere 25.1
Principal sensory trigeminal nucleus
nTPM: 27.1
2324 Male, age 76, both hemispheres 29.9
2367 Female, age 91, left hemisphere 29.3
2158 Male, age 61, both hemispheres 25.3
2008 Male, age 80, left hemisphere 23.8
Reticular pontine nucleus, caudal
nTPM: 25.5
2559 Male, age 74, both hemispheres 27.5
2457 Female, age 91, both hemispheres 27.1
2332 Male, age 80, right hemisphere 24.3
2092 Male, age 76, both hemispheres 23.2
Reticular pontine nucleus, oral
nTPM: 26.2
2366 Female, age 91, both hemispheres 30.7
1939 Male, age 80, both hemispheres 28.9
2012 Female, age 85, both hemispheres 27.3
2167 Male, age 76, both hemispheres 25.3
2361 Male, age 74, both hemispheres 18.8
Reticulotegmental nucleus
nTPM: 26.9
2333 Male, age 80, both hemispheres 28.4
2322 Female, age 91, both hemispheres 27.2
2325 Male, age 76, both hemispheres 26.3
2452 Male, age 74, both hemispheres 25.8
Spinal trigeminal nucleus, caudal
nTPM: 27.7
2390 Female, age 91, both hemispheres 35.2
2308 Male, age 80, both hemispheres 26.6
2642 Male, age 74, both hemispheres 26.3
2447 Male, age 76, both hemispheres 26.2
2312 Male, age 61, both hemispheres 24.3
Spinal trigeminal nucleus, interpolar
nTPM: 31.8
2625 Male, age 61, both hemispheres 44.5
2066 Male, age 76, right hemisphere 31.8
2389 Female, age 91, both hemispheres 28.9
2033 Male, age 80, both hemispheres 27.3
2386 Female, age 85, both hemispheres 26.2
Spinal trigeminal nucleus, oral
nTPM: 27.2
2164 Male, age 80, both hemispheres 29.3
2737 Female, age 85, both hemispheres 28.3
1978 Male, age 76, both hemispheres 24.0
Spinal vestibular nucleus
nTPM: 27.1
2796 Male, age 61, both hemispheres 33.5
2806 Female, age 85, both hemispheres 27.6
2780 Male, age 80, both hemispheres 26.7
2748 Male, age 76, both hemispheres 26.1
2186 Female, age 91, both hemispheres 25.2
2384 Male, age 74, both hemispheres 23.6
Subcoeruleus area
nTPM: 26.1
2323 Female, age 91, left hemisphere 28.4
1958 Male, age 80, both hemispheres 27.9
2369 Female, age 85, left hemisphere 27.3
2089 Male, age 76, left hemisphere 24.4
2451 Male, age 74, both hemispheres 22.3
Superior olive
nTPM: 24.5
2561 Female, age 91, both hemispheres 27.9
2364 Male, age 74, right hemisphere 24.5
2329 Male, age 80, right hemisphere 24.3
1875 Female, age 85, both hemispheres 23.6
2020 Male, age 76, both hemispheres 22.4
Superior vestibular nucleus
nTPM: 29.4
2061 Male, age 76, both hemispheres 34.3
2015 Male, age 80, both hemispheres 27.2
2383 Male, age 74, both hemispheres 26.7
Ventral medullary reticular nucleus
nTPM: 25.1
2060 Male, age 76, both hemispheres 26.8
2372 Male, age 61, both hemispheres 23.4
Ventral periolivary nuclei
nTPM: 25.3
2794 Female, age 91, left hemisphere 26.2
2023 Male, age 76, both hemispheres 25.1
2130 Female, age 85, both hemispheres 24.8
2165 Male, age 80, both hemispheres 24.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 27.2
1986 Male, age 76, both hemispheres 33.8
2180 Male, age 61, both hemispheres 29.0
2741 Female, age 85, both hemispheres 25.1
2118 Male, age 80, both hemispheres 24.8
2302 Female, age 91, both hemispheres 23.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 26.7
2840 Female, age 85, both hemispheres 35.7
2449 Male, age 74, both hemispheres 26.9
2161 Male, age 80, both hemispheres 26.5
2359 Male, age 61, both hemispheres 25.6
1959 Male, age 76, both hemispheres 23.0
2456 Female, age 91, both hemispheres 22.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 37.7
FF:10182-103D2 60 years, female 44.3
FF:10165-103B3 76 years, female 31.1
Medulla oblongata
Scaled Tags Per Million: 29.0
FF:10155-103A2 76 years, female 37.8
FF:10038-101F2 18-64 years, mixed 27.0
FF:10174-103C3 60 years, female 22.2
Pons
Scaled Tags Per Million: 25.9
FF:10033-101E6 18-54 years, mixed 25.9

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 25.5
Pig sample Sample description nTPM
23.024.925.324.425.4024681012141618202224
 		Medulla oblongata
nTPM: 23.5
Samples: 4

Max nTPM: 25.4
Min nTPM: 18.7
Sample A Female 25.3
Sample B Female 24.4
Sample C Male 25.4
Sample D Male 18.7
25.325.926.125.726.302468101214161820222426
 		Pons
nTPM: 25.5
Samples: 4

Max nTPM: 26.3
Min nTPM: 23.9
Sample A Female 26.0
Sample B Female 23.9
Sample C Male 25.7
Sample D Male 26.3

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 6.3
Mouse sample Sample description nTPM
6.16.36.56.06.60.00.51.01.52.02.53.03.54.04.55.05.56.06.5
 		Pons and medulla
nTPM: 6.3
Samples: 4

Max nTPM: 6.6
Min nTPM: 6.0
Sample A Male 6.4
Sample B Male 6.6
Sample C Female 6.1
Sample D Female 6.0

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.5
74958463 Antisense, RP_060315_05_B01, Mouse strain C57BL/6J (56 days, male) 0.7
70201594 Antisense, RP_050517_04_G08, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.4
74958463 Antisense, RP_060315_05_B01, Mouse strain C57BL/6J (56 days, male) 0.6
70201594 Antisense, RP_050517_04_G08, Mouse strain C57BL/6J (56 days, male) 0.3

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