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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.1
nTPM
Monaco:
144.2
nTPM
Schmiedel:
132.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.1
HPA sample
nTPM
gdT-cell nTPM: 49.6
Samples: 6
Max nTPM: 59.0
Min nTPM: 34.2
P10809_1007
37.2
P10809_1022
56.2
P10809_1041
56.7
P10809_1060
54.3
P10809_1077
59.0
P10809_1098
34.2
MAIT T-cell nTPM: 49.8
Samples: 6
Max nTPM: 69.1
Min nTPM: 36.3
P10809_1006
36.3
P10809_1024
69.1
P10809_1043
49.6
P10809_1062
43.7
P10809_1083
50.3
P10809_1097
49.5
Memory CD4 T-cell nTPM: 46.9
Samples: 6
Max nTPM: 54.6
Min nTPM: 38.4
P10809_1014
38.4
P10809_1026
53.8
P10809_1045
47.0
P10809_1064
54.6
P10809_1086
48.5
P10809_1113
39.2
Memory CD8 T-cell nTPM: 48.1
Samples: 5
Max nTPM: 54.2
Min nTPM: 41.4
P10809_1012
41.4
P10809_1027
54.2
P10809_1046
52.0
P10809_1065
49.8
P10809_1111
43.0
Naive CD4 T-cell nTPM: 51.1
Samples: 6
Max nTPM: 56.0
Min nTPM: 41.5
P10809_1015
41.5
P10809_1030
56.0
P10809_1049
54.7
P10809_1068
55.9
P10809_1085
54.2
P10809_1112
44.1
Naive CD8 T-cell nTPM: 46.0
Samples: 6
Max nTPM: 54.1
Min nTPM: 39.1
P10809_1016
41.0
P10809_1031
43.5
P10809_1050
45.9
P10809_1069
54.1
P10809_1087
52.1
P10809_1110
39.1
T-reg nTPM: 47.0
Samples: 6
Max nTPM: 54.0
Min nTPM: 39.5
P10809_1018
39.5
P10809_1037
44.6
P10809_1056
53.0
P10809_1075
54.0
P10809_1094
49.2
P10809_1106
41.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
144.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 125.1
Samples: 4
Max nTPM: 138.5
Min nTPM: 114.7
RHH5202_R3573
138.5
RHH5230_R3602
120.3
RHH5259_R3631
114.7
RHH5288_R3660
126.9
Effector memory CD8 T-cell nTPM: 134.1
Samples: 4
Max nTPM: 169.4
Min nTPM: 101.7
RHH5203_R3574
169.4
RHH5231_R3603
101.7
RHH5260_R3632
124.7
RHH5289_R3661
140.7
MAIT T-cell nTPM: 118.3
Samples: 4
Max nTPM: 149.2
Min nTPM: 96.0
RHH5233_R3605
149.2
RHH5205_R3576
96.0
RHH5262_R3634
111.7
RHH5297_R3663
116.3
Memory CD4 T-cell TFH nTPM: 144.3
Samples: 4
Max nTPM: 160.1
Min nTPM: 134.6
RHH5300_R3666
134.6
RHH5236_R3608
138.3
RHH5265_R3637
160.1
RHH5208_R3579
144.1
Memory CD4 T-cell Th1 nTPM: 121.4
Samples: 4
Max nTPM: 156.8
Min nTPM: 84.9
RHH5210_R3581
132.9
RHH5302_R3668
156.8
RHH5238_R3610
84.9
RHH5267_R3639
111.1
Memory CD4 T-cell Th1/Th17 nTPM: 122.3
Samples: 4
Max nTPM: 135.6
Min nTPM: 109.3
RHH5303_R3669
127.0
RHH5211_R3582
135.6
RHH5239_R3611
117.3
RHH5268_R3640
109.3
Memory CD4 T-cell Th17 nTPM: 117.4
Samples: 4
Max nTPM: 127.8
Min nTPM: 108.8
RHH5304_R3670
117.4
RHH5212_R3583
127.8
RHH5240_R3612
115.6
RHH5269_R3641
108.8
Memory CD4 T-cell Th2 nTPM: 134.4
Samples: 4
Max nTPM: 141.4
Min nTPM: 128.7
RHH5305_R3671
129.3
RHH5213_R3584
141.4
RHH5241_R3613
138.2
RHH5270_R3642
128.7
Naive CD4 T-cell nTPM: 116.3
Samples: 4
Max nTPM: 140.3
Min nTPM: 102.2
RHH5306_R3672
102.2
RHH5214_R3585
111.7
RHH5242_R3614
110.8
RHH5271_R3643
140.3
Naive CD8 T-cell nTPM: 120.3
Samples: 4
Max nTPM: 141.3
Min nTPM: 85.8
RHH5201_R3572
135.5
RHH5229_R3601
85.8
RHH5258_R3630
141.3
RHH5287_R3659
118.5
Non-Vd2 gdTCR nTPM: 127.0
Samples: 4
Max nTPM: 139.0
Min nTPM: 118.4
RHH5235_R3607
139.0
RHH5264_R3636
122.2
RHH5207_R3578
128.2
RHH5299_R3665
118.4
T-reg nTPM: 122.4
Samples: 4
Max nTPM: 157.7
Min nTPM: 99.2
RHH5301_R3667
116.4
RHH5237_R3609
157.7
RHH5266_R3638
116.3
RHH5209_R3580
99.2
Terminal effector memory CD4 T-cell nTPM: 123.2
Samples: 2
Max nTPM: 145.1
Min nTPM: 101.3
RHH5243_R3615
101.3
RHH5272_R3644
145.1
Terminal effector memory CD8 T-cell nTPM: 132.1
Samples: 4
Max nTPM: 157.2
Min nTPM: 105.0
RHH5232_R3604
157.2
RHH5204_R3575
105.0
RHH5261_R3633
112.2
RHH5296_R3662
153.8
Vd2 gdTCR nTPM: 121.4
Samples: 4
Max nTPM: 127.3
Min nTPM: 114.2
RHH5234_R3606
123.0
RHH5206_R3577
114.2
RHH5263_R3635
121.2
RHH5298_R3664
127.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
