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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
947.6
nTPM
Monaco:
640.7
nTPM
Schmiedel:
401.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
947.6
HPA sample
nTPM
gdT-cell nTPM: 583.1
Samples: 6
Max nTPM: 659.1
Min nTPM: 509.8
P10809_1007
659.1
P10809_1022
509.8
P10809_1041
581.3
P10809_1060
520.0
P10809_1077
614.7
P10809_1098
613.5
MAIT T-cell nTPM: 853.8
Samples: 6
Max nTPM: 946.8
Min nTPM: 762.7
P10809_1006
871.4
P10809_1024
905.0
P10809_1043
762.7
P10809_1062
797.0
P10809_1083
839.6
P10809_1097
946.8
Memory CD4 T-cell nTPM: 825.8
Samples: 6
Max nTPM: 923.7
Min nTPM: 738.6
P10809_1014
923.7
P10809_1026
821.9
P10809_1045
888.3
P10809_1064
738.6
P10809_1086
746.8
P10809_1113
835.5
Memory CD8 T-cell nTPM: 726.8
Samples: 5
Max nTPM: 811.1
Min nTPM: 672.5
P10809_1012
811.1
P10809_1027
703.1
P10809_1046
697.8
P10809_1065
672.5
P10809_1111
749.5
Naive CD4 T-cell nTPM: 945.0
Samples: 6
Max nTPM: 1191.0
Min nTPM: 862.3
P10809_1015
1191.0
P10809_1030
908.5
P10809_1049
913.2
P10809_1068
926.6
P10809_1085
868.5
P10809_1112
862.3
Naive CD8 T-cell nTPM: 837.7
Samples: 6
Max nTPM: 1161.5
Min nTPM: 673.5
P10809_1016
1161.5
P10809_1031
831.0
P10809_1050
715.9
P10809_1069
770.3
P10809_1087
673.5
P10809_1110
873.9
T-reg nTPM: 947.6
Samples: 6
Max nTPM: 1033.1
Min nTPM: 851.3
P10809_1018
851.3
P10809_1037
904.0
P10809_1056
915.0
P10809_1075
1012.8
P10809_1094
969.5
P10809_1106
1033.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
640.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 511.3
Samples: 4
Max nTPM: 717.9
Min nTPM: 401.7
RHH5202_R3573
441.3
RHH5230_R3602
401.7
RHH5259_R3631
484.2
RHH5288_R3660
717.9
Effector memory CD8 T-cell nTPM: 290.1
Samples: 4
Max nTPM: 337.3
Min nTPM: 221.3
RHH5203_R3574
337.3
RHH5231_R3603
307.5
RHH5260_R3632
294.3
RHH5289_R3661
221.3
MAIT T-cell nTPM: 524.5
Samples: 4
Max nTPM: 810.0
Min nTPM: 386.6
RHH5233_R3605
453.4
RHH5205_R3576
386.6
RHH5262_R3634
448.0
RHH5297_R3663
810.0
Memory CD4 T-cell TFH nTPM: 554.8
Samples: 4
Max nTPM: 637.7
Min nTPM: 477.9
RHH5300_R3666
637.7
RHH5236_R3608
590.6
RHH5265_R3637
477.9
RHH5208_R3579
513.0
Memory CD4 T-cell Th1 nTPM: 610.1
Samples: 4
Max nTPM: 960.6
Min nTPM: 445.5
RHH5210_R3581
527.7
RHH5302_R3668
960.6
RHH5238_R3610
506.4
RHH5267_R3639
445.5
Memory CD4 T-cell Th1/Th17 nTPM: 514.8
Samples: 4
Max nTPM: 689.1
Min nTPM: 394.4
RHH5303_R3669
689.1
RHH5211_R3582
512.8
RHH5239_R3611
394.4
RHH5268_R3640
462.8
Memory CD4 T-cell Th17 nTPM: 457.9
Samples: 4
Max nTPM: 608.0
Min nTPM: 333.2
RHH5304_R3670
521.4
RHH5212_R3583
608.0
RHH5240_R3612
333.2
RHH5269_R3641
369.1
Memory CD4 T-cell Th2 nTPM: 576.9
Samples: 4
Max nTPM: 701.4
Min nTPM: 424.8
RHH5305_R3671
669.0
RHH5213_R3584
512.2
RHH5241_R3613
701.4
RHH5270_R3642
424.8
Naive CD4 T-cell nTPM: 640.7
Samples: 4
Max nTPM: 766.5
Min nTPM: 451.3
RHH5306_R3672
766.5
RHH5214_R3585
751.5
RHH5242_R3614
593.5
RHH5271_R3643
451.3
Naive CD8 T-cell nTPM: 609.2
Samples: 4
Max nTPM: 756.9
Min nTPM: 517.3
RHH5201_R3572
517.3
RHH5229_R3601
532.5
RHH5258_R3630
756.9
RHH5287_R3659
630.0
Non-Vd2 gdTCR nTPM: 371.6
Samples: 4
Max nTPM: 576.4
Min nTPM: 260.4
RHH5235_R3607
260.4
RHH5264_R3636
359.4
RHH5207_R3578
290.1
RHH5299_R3665
576.4
T-reg nTPM: 574.9
Samples: 4
Max nTPM: 940.2
Min nTPM: 422.5
RHH5301_R3667
940.2
RHH5237_R3609
458.7
RHH5266_R3638
422.5
RHH5209_R3580
478.3
Terminal effector memory CD4 T-cell nTPM: 341.6
Samples: 2
Max nTPM: 401.0
Min nTPM: 282.2
RHH5243_R3615
282.2
RHH5272_R3644
401.0
Terminal effector memory CD8 T-cell nTPM: 527.7
Samples: 4
Max nTPM: 979.4
Min nTPM: 320.3
RHH5232_R3604
323.5
RHH5204_R3575
979.4
RHH5261_R3633
320.3
RHH5296_R3662
487.4
Vd2 gdTCR nTPM: 623.1
Samples: 4
Max nTPM: 861.8
Min nTPM: 387.8
RHH5234_R3606
405.3
RHH5206_R3577
861.8
RHH5263_R3635
387.8
RHH5298_R3664
837.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.