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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
41.9
nTPM
Monaco:
139.0
nTPM
Schmiedel:
58.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.9
HPA sample
nTPM
gdT-cell nTPM: 28.1
Samples: 6
Max nTPM: 31.7
Min nTPM: 23.0
P10809_1007
23.0
P10809_1022
31.7
P10809_1041
26.3
P10809_1060
25.4
P10809_1077
31.6
P10809_1098
30.3
MAIT T-cell nTPM: 37.4
Samples: 6
Max nTPM: 41.0
Min nTPM: 28.5
P10809_1006
39.8
P10809_1024
41.0
P10809_1043
28.5
P10809_1062
38.7
P10809_1083
36.0
P10809_1097
40.4
Memory CD4 T-cell nTPM: 34.0
Samples: 6
Max nTPM: 38.2
Min nTPM: 29.8
P10809_1014
38.2
P10809_1026
29.8
P10809_1045
32.0
P10809_1064
31.7
P10809_1086
36.0
P10809_1113
36.5
Memory CD8 T-cell nTPM: 30.3
Samples: 5
Max nTPM: 43.3
Min nTPM: 23.3
P10809_1012
29.9
P10809_1027
29.6
P10809_1046
25.4
P10809_1065
23.3
P10809_1111
43.3
Naive CD4 T-cell nTPM: 41.9
Samples: 6
Max nTPM: 49.1
Min nTPM: 31.0
P10809_1015
47.5
P10809_1030
39.2
P10809_1049
31.0
P10809_1068
49.1
P10809_1085
40.8
P10809_1112
43.8
Naive CD8 T-cell nTPM: 39.2
Samples: 6
Max nTPM: 43.9
Min nTPM: 32.0
P10809_1016
40.9
P10809_1031
43.7
P10809_1050
36.2
P10809_1069
38.7
P10809_1087
32.0
P10809_1110
43.9
T-reg nTPM: 36.0
Samples: 6
Max nTPM: 49.3
Min nTPM: 27.3
P10809_1018
33.6
P10809_1037
49.3
P10809_1056
34.2
P10809_1075
40.8
P10809_1094
27.3
P10809_1106
31.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
139.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 113.4
Samples: 4
Max nTPM: 143.4
Min nTPM: 93.8
RHH5202_R3573
93.8
RHH5230_R3602
107.9
RHH5259_R3631
108.6
RHH5288_R3660
143.4
Effector memory CD8 T-cell nTPM: 130.6
Samples: 4
Max nTPM: 138.6
Min nTPM: 113.9
RHH5203_R3574
138.6
RHH5231_R3603
138.6
RHH5260_R3632
113.9
RHH5289_R3661
131.3
MAIT T-cell nTPM: 129.7
Samples: 4
Max nTPM: 151.2
Min nTPM: 111.1
RHH5233_R3605
112.6
RHH5205_R3576
151.2
RHH5262_R3634
143.7
RHH5297_R3663
111.1
Memory CD4 T-cell TFH nTPM: 110.7
Samples: 4
Max nTPM: 131.6
Min nTPM: 89.7
RHH5300_R3666
89.7
RHH5236_R3608
105.7
RHH5265_R3637
131.6
RHH5208_R3579
115.8
Memory CD4 T-cell Th1 nTPM: 108.9
Samples: 4
Max nTPM: 132.3
Min nTPM: 88.4
RHH5210_R3581
132.3
RHH5302_R3668
100.0
RHH5238_R3610
88.4
RHH5267_R3639
115.0
Memory CD4 T-cell Th1/Th17 nTPM: 103.5
Samples: 4
Max nTPM: 114.5
Min nTPM: 95.3
RHH5303_R3669
114.5
RHH5211_R3582
101.6
RHH5239_R3611
95.3
RHH5268_R3640
102.6
Memory CD4 T-cell Th17 nTPM: 110.4
Samples: 4
Max nTPM: 128.3
Min nTPM: 92.3
RHH5304_R3670
110.5
RHH5212_R3583
92.3
RHH5240_R3612
128.3
RHH5269_R3641
110.6
Memory CD4 T-cell Th2 nTPM: 122.2
Samples: 4
Max nTPM: 133.5
Min nTPM: 101.2
RHH5305_R3671
133.5
RHH5213_R3584
128.2
RHH5241_R3613
101.2
RHH5270_R3642
125.7
Naive CD4 T-cell nTPM: 138.9
Samples: 4
Max nTPM: 163.5
Min nTPM: 127.0
RHH5306_R3672
134.8
RHH5214_R3585
127.0
RHH5242_R3614
130.4
RHH5271_R3643
163.5
Naive CD8 T-cell nTPM: 130.3
Samples: 4
Max nTPM: 166.5
Min nTPM: 85.2
RHH5201_R3572
137.1
RHH5229_R3601
85.2
RHH5258_R3630
132.5
RHH5287_R3659
166.5
Non-Vd2 gdTCR nTPM: 113.8
Samples: 4
Max nTPM: 141.9
Min nTPM: 78.9
RHH5235_R3607
119.8
RHH5264_R3636
114.6
RHH5207_R3578
141.9
RHH5299_R3665
78.9
T-reg nTPM: 108.2
Samples: 4
Max nTPM: 122.7
Min nTPM: 98.8
RHH5301_R3667
105.0
RHH5237_R3609
106.4
RHH5266_R3638
122.7
RHH5209_R3580
98.8
Terminal effector memory CD4 T-cell nTPM: 128.8
Samples: 2
Max nTPM: 131.0
Min nTPM: 126.6
RHH5243_R3615
131.0
RHH5272_R3644
126.6
Terminal effector memory CD8 T-cell nTPM: 115.3
Samples: 4
Max nTPM: 131.0
Min nTPM: 107.7
RHH5232_R3604
131.0
RHH5204_R3575
110.9
RHH5261_R3633
111.5
RHH5296_R3662
107.7
Vd2 gdTCR nTPM: 112.0
Samples: 4
Max nTPM: 131.7
Min nTPM: 90.4
RHH5234_R3606
90.4
RHH5206_R3577
122.0
RHH5263_R3635
131.7
RHH5298_R3664
103.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
