HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:12.9 nTPM
HPA Brain:35.9 nTPM
GTEx:12.9 nTPM
FANTOM5:40.9 Scaled Tags Per Million
Pig:16.7 nTPM
Mouse:21.5 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000658
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.9
Sample id Sample description nTPM
Hippocampus
nTPM: 28.6
1911 Female, age 85, right hemisphere 30.6
2529 Female, age 94, left hemisphere 30.5
2621 Female, age 67, right hemisphere 28.6
2148 Female, age 91, left hemisphere 28.1
1855 Male, age 76, left hemisphere 27.7
1898 Male, age 80, left hemisphere 26.0
Dentate gyrus
nTPM: 28.0
2531 Female, age 67, both hemispheres 30.1
2528 Male, age 74, both hemispheres 28.8
2530 Female, age 94, left hemisphere 28.7
1927 Female, age 91, both hemispheres 27.3
2246 Female, age 85, both hemispheres 27.3
2010 Male, age 76, both hemispheres 25.7
Entorhinal gyrus
nTPM: 35.9
2764 Male, age 80, right hemisphere 40.2
2117 Female, age 91, right hemisphere 39.3
2613 Female, age 94, left hemisphere 37.2
1787 Male, age 76, left hemisphere 34.0
1938 Female, age 85, left hemisphere 33.8
2686 Male, age 75, right hemisphere 31.0
Hippocampus, CA1
nTPM: 28.8
2749 Male, age 80, left hemisphere 31.6
2527 Male, age 74, both hemispheres 28.6
1873 Female, age 85, both hemispheres 28.0
2082 Female, age 91, right hemisphere 27.9
2045 Male, age 76, both hemispheres 27.8
Hippocampus, CA2
nTPM: 29.8
1940 Female, age 85, left hemisphere 32.4
2437 Female, age 94, left hemisphere 30.0
2113 Female, age 91, right hemisphere 29.9
1963 Male, age 80, left hemisphere 29.2
2249 Male, age 74, both hemispheres 28.7
1892 Male, age 76, both hemispheres 28.4
Hippocampus, CA3
nTPM: 29.2
1891 Female, age 85, both hemispheres 34.3
2620 Female, age 94, left hemisphere 31.6
2137 Male, age 80, left hemisphere 29.9
1867 Male, age 76, both hemispheres 27.6
2436 Male, age 74, both hemispheres 25.9
2861 Female, age 67, both hemispheres 25.8
Parahippocampal cortex
nTPM: 31.4
1850 Male, age 80, both hemispheres 36.1
1990 Female, age 91, right hemisphere 34.3
1933 Female, age 85, both hemispheres 33.5
2692 Male, age 74, both hemispheres 33.4
2532 Female, age 72, left hemisphere 32.7
2693 Female, age 94, both hemispheres 30.9
2245 Female, age 91, both hemispheres 29.6
2622 Female, age 67, right hemisphere 29.5
2250 Female, age 67, right hemisphere 27.1
2018 Male, age 76, both hemispheres 26.3
Perirhinal gyrus
nTPM: 34.0
1794 Male, age 80, right hemisphere 36.1
2848 Male, age 76, right hemisphere 34.2
1841 Female, age 85, right hemisphere 33.8
2521 Female, age 94, right hemisphere 33.5
1847 Female, age 91, left hemisphere 32.4
Subiculum
nTPM: 32.9
2042 Male, age 76, both hemispheres 37.4
1901 Male, age 80, both hemispheres 36.2
1977 Female, age 85, both hemispheres 35.9
2619 Male, age 74, both hemispheres 30.6
2729 Female, age 91, right hemisphere 29.6
2438 Female, age 94, left hemisphere 28.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 26.4
Min nTPM: 5.2
Std nTPM: 3.0
Median nTPM: 12.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 26.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 24.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 22.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 20.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 19.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 19.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 19.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 19.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 18.3
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 17.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.9
FF:10153-102I9 76 years, female 43.4
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.7
Pig sample Sample description nTPM
Subiculum
nTPM: 15.6
Samples: 4

Max nTPM: 16.9
Min nTPM: 13.1
Sample A Female 16.9
Sample B Female 15.8
Sample C Male 16.6
Sample D Male 13.1
Dorsal hippocampus
nTPM: 16.5
Samples: 4

Max nTPM: 18.9
Min nTPM: 14.2
Sample A Female 18.9
Sample B Female 18.2
Sample C Male 14.8
Sample D Male 14.2
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.2
Min nTPM: 14.8
Sample A Female 15.6
Sample B Female 14.8
Sample C Male 17.2
Sample D Male 14.8
Ventral hippocampus
nTPM: 16.8
Samples: 4

Max nTPM: 19.8
Min nTPM: 13.1
Sample A Female 14.5
Sample B Female 13.1
Sample C Male 19.8
Sample D Male 19.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 24.0
Min nTPM: 18.2
Sample A Male 21.8
Sample B Male 22.1
Sample C Female 18.2
Sample D Female 24.0
Hippocampal formation
nTPM: 18.4
Samples: 4

Max nTPM: 21.1
Min nTPM: 15.8
Sample A Male 17.4
Sample B Male 21.1
Sample C Female 19.3
Sample D Female 15.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
70218420 Antisense, RP_050519_04_B04, Mouse strain C57BL/6J (56 days, male) 1.8

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