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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.7
nTPM
Monaco:
142.9
nTPM
Schmiedel:
78.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.7
HPA sample
nTPM
gdT-cell nTPM: 35.0
Samples: 6
Max nTPM: 41.5
Min nTPM: 25.6
P10809_1007
37.2
P10809_1022
29.2
P10809_1041
41.5
P10809_1060
25.6
P10809_1077
37.3
P10809_1098
38.9
MAIT T-cell nTPM: 46.5
Samples: 6
Max nTPM: 67.6
Min nTPM: 31.8
P10809_1006
46.7
P10809_1024
38.9
P10809_1043
31.8
P10809_1062
45.0
P10809_1083
49.1
P10809_1097
67.6
Memory CD4 T-cell nTPM: 43.6
Samples: 6
Max nTPM: 60.9
Min nTPM: 35.2
P10809_1014
43.7
P10809_1026
40.1
P10809_1045
60.9
P10809_1064
44.7
P10809_1086
36.7
P10809_1113
35.2
Memory CD8 T-cell nTPM: 46.3
Samples: 5
Max nTPM: 52.4
Min nTPM: 41.9
P10809_1012
43.6
P10809_1027
41.9
P10809_1046
52.4
P10809_1065
42.4
P10809_1111
51.3
Naive CD4 T-cell nTPM: 38.6
Samples: 6
Max nTPM: 55.5
Min nTPM: 27.5
P10809_1015
41.9
P10809_1030
29.7
P10809_1049
55.5
P10809_1068
27.5
P10809_1085
46.9
P10809_1112
30.2
Naive CD8 T-cell nTPM: 41.1
Samples: 6
Max nTPM: 50.4
Min nTPM: 31.5
P10809_1016
34.3
P10809_1031
40.9
P10809_1050
47.1
P10809_1069
50.4
P10809_1087
31.5
P10809_1110
42.3
T-reg nTPM: 58.7
Samples: 6
Max nTPM: 93.0
Min nTPM: 31.4
P10809_1018
31.4
P10809_1037
61.9
P10809_1056
93.0
P10809_1075
65.6
P10809_1094
38.6
P10809_1106
61.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
142.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 113.7
Samples: 4
Max nTPM: 178.6
Min nTPM: 67.9
RHH5202_R3573
67.9
RHH5230_R3602
178.6
RHH5259_R3631
115.6
RHH5288_R3660
92.5
Effector memory CD8 T-cell nTPM: 142.9
Samples: 4
Max nTPM: 198.2
Min nTPM: 106.1
RHH5203_R3574
113.0
RHH5231_R3603
198.2
RHH5260_R3632
154.1
RHH5289_R3661
106.1
MAIT T-cell nTPM: 126.2
Samples: 4
Max nTPM: 196.0
Min nTPM: 77.5
RHH5233_R3605
127.3
RHH5205_R3576
103.9
RHH5262_R3634
196.0
RHH5297_R3663
77.5
Memory CD4 T-cell TFH nTPM: 114.5
Samples: 4
Max nTPM: 189.6
Min nTPM: 48.6
RHH5300_R3666
144.4
RHH5236_R3608
189.6
RHH5265_R3637
75.3
RHH5208_R3579
48.6
Memory CD4 T-cell Th1 nTPM: 114.7
Samples: 4
Max nTPM: 149.6
Min nTPM: 85.0
RHH5210_R3581
85.0
RHH5302_R3668
103.4
RHH5238_R3610
120.8
RHH5267_R3639
149.6
Memory CD4 T-cell Th1/Th17 nTPM: 117.3
Samples: 4
Max nTPM: 146.8
Min nTPM: 96.0
RHH5303_R3669
97.9
RHH5211_R3582
128.5
RHH5239_R3611
96.0
RHH5268_R3640
146.8
Memory CD4 T-cell Th17 nTPM: 120.8
Samples: 4
Max nTPM: 162.7
Min nTPM: 65.7
RHH5304_R3670
65.7
RHH5212_R3583
160.0
RHH5240_R3612
94.6
RHH5269_R3641
162.7
Memory CD4 T-cell Th2 nTPM: 120.3
Samples: 4
Max nTPM: 168.7
Min nTPM: 91.1
RHH5305_R3671
91.1
RHH5213_R3584
129.3
RHH5241_R3613
91.9
RHH5270_R3642
168.7
Naive CD4 T-cell nTPM: 133.9
Samples: 4
Max nTPM: 142.1
Min nTPM: 126.3
RHH5306_R3672
140.2
RHH5214_R3585
142.1
RHH5242_R3614
126.9
RHH5271_R3643
126.3
Naive CD8 T-cell nTPM: 90.9
Samples: 4
Max nTPM: 112.6
Min nTPM: 68.9
RHH5201_R3572
68.9
RHH5229_R3601
112.6
RHH5258_R3630
85.7
RHH5287_R3659
96.2
Non-Vd2 gdTCR nTPM: 131.3
Samples: 4
Max nTPM: 193.9
Min nTPM: 93.5
RHH5235_R3607
193.9
RHH5264_R3636
102.0
RHH5207_R3578
93.5
RHH5299_R3665
135.6
T-reg nTPM: 121.4
Samples: 4
Max nTPM: 155.6
Min nTPM: 100.6
RHH5301_R3667
100.6
RHH5237_R3609
155.6
RHH5266_R3638
125.3
RHH5209_R3580
104.2
Terminal effector memory CD4 T-cell nTPM: 95.1
Samples: 2
Max nTPM: 120.7
Min nTPM: 69.5
RHH5243_R3615
120.7
RHH5272_R3644
69.5
Terminal effector memory CD8 T-cell nTPM: 120.8
Samples: 4
Max nTPM: 167.1
Min nTPM: 100.8
RHH5232_R3604
104.5
RHH5204_R3575
100.8
RHH5261_R3633
167.1
RHH5296_R3662
110.7
Vd2 gdTCR nTPM: 137.4
Samples: 4
Max nTPM: 193.8
Min nTPM: 68.1
RHH5234_R3606
172.4
RHH5206_R3577
68.1
RHH5263_R3635
193.8
RHH5298_R3664
115.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
