We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.4
nTPM
Monaco:
105.1
nTPM
Schmiedel:
62.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.4
HPA sample
nTPM
gdT-cell nTPM: 41.4
Samples: 6
Max nTPM: 60.5
Min nTPM: 26.9
P10809_1007
26.9
P10809_1022
41.8
P10809_1041
60.5
P10809_1060
34.0
P10809_1077
48.3
P10809_1098
36.7
MAIT T-cell nTPM: 26.6
Samples: 6
Max nTPM: 39.8
Min nTPM: 18.7
P10809_1006
22.9
P10809_1024
18.7
P10809_1043
39.8
P10809_1062
21.6
P10809_1083
36.3
P10809_1097
20.0
Memory CD4 T-cell nTPM: 33.7
Samples: 6
Max nTPM: 43.0
Min nTPM: 17.0
P10809_1014
30.7
P10809_1026
43.0
P10809_1045
40.9
P10809_1064
39.5
P10809_1086
31.1
P10809_1113
17.0
Memory CD8 T-cell nTPM: 49.4
Samples: 5
Max nTPM: 60.3
Min nTPM: 41.8
P10809_1012
41.8
P10809_1027
49.3
P10809_1046
49.6
P10809_1065
60.3
P10809_1111
46.2
Naive CD4 T-cell nTPM: 25.4
Samples: 6
Max nTPM: 60.5
Min nTPM: 12.3
P10809_1015
13.6
P10809_1030
13.4
P10809_1049
60.5
P10809_1068
12.3
P10809_1085
36.4
P10809_1112
16.1
Naive CD8 T-cell nTPM: 36.2
Samples: 6
Max nTPM: 78.7
Min nTPM: 6.4
P10809_1016
6.4
P10809_1031
25.6
P10809_1050
37.7
P10809_1069
78.7
P10809_1087
40.7
P10809_1110
28.0
T-reg nTPM: 29.8
Samples: 6
Max nTPM: 55.9
Min nTPM: 13.7
P10809_1018
13.7
P10809_1037
18.3
P10809_1056
55.9
P10809_1075
29.8
P10809_1094
38.1
P10809_1106
23.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
105.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 55.0
Samples: 4
Max nTPM: 83.4
Min nTPM: 28.5
RHH5202_R3573
60.2
RHH5230_R3602
83.4
RHH5259_R3631
28.5
RHH5288_R3660
47.9
Effector memory CD8 T-cell nTPM: 105.1
Samples: 4
Max nTPM: 183.2
Min nTPM: 35.5
RHH5203_R3574
183.2
RHH5231_R3603
126.3
RHH5260_R3632
75.2
RHH5289_R3661
35.5
MAIT T-cell nTPM: 56.2
Samples: 4
Max nTPM: 90.8
Min nTPM: 32.2
RHH5233_R3605
44.5
RHH5205_R3576
90.8
RHH5262_R3634
57.1
RHH5297_R3663
32.2
Memory CD4 T-cell TFH nTPM: 33.1
Samples: 4
Max nTPM: 42.1
Min nTPM: 16.0
RHH5300_R3666
42.1
RHH5236_R3608
34.5
RHH5265_R3637
16.0
RHH5208_R3579
39.7
Memory CD4 T-cell Th1 nTPM: 40.8
Samples: 4
Max nTPM: 58.9
Min nTPM: 20.8
RHH5210_R3581
58.9
RHH5302_R3668
40.4
RHH5238_R3610
20.8
RHH5267_R3639
42.9
Memory CD4 T-cell Th1/Th17 nTPM: 57.9
Samples: 4
Max nTPM: 112.7
Min nTPM: 27.3
RHH5303_R3669
28.8
RHH5211_R3582
112.7
RHH5239_R3611
27.3
RHH5268_R3640
62.9
Memory CD4 T-cell Th17 nTPM: 42.4
Samples: 4
Max nTPM: 72.5
Min nTPM: 21.5
RHH5304_R3670
29.2
RHH5212_R3583
72.5
RHH5240_R3612
21.5
RHH5269_R3641
46.3
Memory CD4 T-cell Th2 nTPM: 39.4
Samples: 4
Max nTPM: 53.4
Min nTPM: 24.2
RHH5305_R3671
24.2
RHH5213_R3584
53.4
RHH5241_R3613
30.2
RHH5270_R3642
49.7
Naive CD4 T-cell nTPM: 43.6
Samples: 4
Max nTPM: 93.0
Min nTPM: 14.5
RHH5306_R3672
37.9
RHH5214_R3585
93.0
RHH5242_R3614
14.5
RHH5271_R3643
28.8
Naive CD8 T-cell nTPM: 18.3
Samples: 4
Max nTPM: 25.5
Min nTPM: 10.2
RHH5201_R3572
20.1
RHH5229_R3601
10.2
RHH5258_R3630
17.3
RHH5287_R3659
25.5
Non-Vd2 gdTCR nTPM: 41.3
Samples: 4
Max nTPM: 60.8
Min nTPM: 20.0
RHH5235_R3607
60.8
RHH5264_R3636
46.9
RHH5207_R3578
20.0
RHH5299_R3665
37.4
T-reg nTPM: 29.0
Samples: 4
Max nTPM: 37.8
Min nTPM: 23.5
RHH5301_R3667
23.5
RHH5237_R3609
28.0
RHH5266_R3638
26.7
RHH5209_R3580
37.8
Terminal effector memory CD4 T-cell nTPM: 45.3
Samples: 2
Max nTPM: 62.5
Min nTPM: 28.0
RHH5243_R3615
62.5
RHH5272_R3644
28.0
Terminal effector memory CD8 T-cell nTPM: 56.0
Samples: 4
Max nTPM: 68.7
Min nTPM: 29.1
RHH5232_R3604
64.3
RHH5204_R3575
61.9
RHH5261_R3633
68.7
RHH5296_R3662
29.1
Vd2 gdTCR nTPM: 59.6
Samples: 4
Max nTPM: 103.0
Min nTPM: 32.8
RHH5234_R3606
32.8
RHH5206_R3577
103.0
RHH5263_R3635
67.0
RHH5298_R3664
35.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
