HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:19.0 nTPM
HPA Brain:107.6 nTPM
GTEx:19.0 nTPM
FANTOM5:37.0 Scaled Tags Per Million
Pig:64.4 nTPM
Mouse:226.0 nTPM
Allen mouse:17.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051082
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 107.6
Sample id Sample description nTPM
Hippocampus
nTPM: 76.7
2621 Female, age 67, right hemisphere 105.4
2148 Female, age 91, left hemisphere 97.1
1911 Female, age 85, right hemisphere 87.3
1898 Male, age 80, left hemisphere 61.2
2529 Female, age 94, left hemisphere 56.0
1855 Male, age 76, left hemisphere 53.2
Dentate gyrus
nTPM: 89.3
2531 Female, age 67, both hemispheres 179.4
1927 Female, age 91, both hemispheres 118.0
2246 Female, age 85, both hemispheres 68.2
2010 Male, age 76, both hemispheres 60.6
2530 Female, age 94, left hemisphere 56.6
2528 Male, age 74, both hemispheres 53.2
Entorhinal gyrus
nTPM: 75.3
2613 Female, age 94, left hemisphere 92.1
2764 Male, age 80, right hemisphere 89.9
1938 Female, age 85, left hemisphere 79.4
1787 Male, age 76, left hemisphere 74.3
2686 Male, age 75, right hemisphere 69.0
2117 Female, age 91, right hemisphere 47.1
Hippocampus, CA1
nTPM: 91.8
2749 Male, age 80, left hemisphere 171.0
2045 Male, age 76, both hemispheres 105.4
1873 Female, age 85, both hemispheres 68.5
2527 Male, age 74, both hemispheres 64.8
2082 Female, age 91, right hemisphere 49.4
Hippocampus, CA2
nTPM: 63.4
1940 Female, age 85, left hemisphere 90.5
1892 Male, age 76, both hemispheres 67.6
1963 Male, age 80, left hemisphere 65.9
2113 Female, age 91, right hemisphere 60.0
2437 Female, age 94, left hemisphere 51.1
2249 Male, age 74, both hemispheres 45.4
Hippocampus, CA3
nTPM: 107.6
2620 Female, age 94, left hemisphere 165.1
2137 Male, age 80, left hemisphere 160.0
2861 Female, age 67, both hemispheres 139.3
1867 Male, age 76, both hemispheres 78.6
1891 Female, age 85, both hemispheres 61.7
2436 Male, age 74, both hemispheres 40.9
Parahippocampal cortex
nTPM: 78.7
2245 Female, age 91, both hemispheres 99.3
2532 Female, age 72, left hemisphere 93.2
2622 Female, age 67, right hemisphere 89.0
1933 Female, age 85, both hemispheres 84.7
2250 Female, age 67, right hemisphere 83.1
2693 Female, age 94, both hemispheres 80.0
1850 Male, age 80, both hemispheres 79.6
1990 Female, age 91, right hemisphere 73.0
2018 Male, age 76, both hemispheres 64.4
2692 Male, age 74, both hemispheres 40.5
Perirhinal gyrus
nTPM: 96.9
1847 Female, age 91, left hemisphere 105.1
1794 Male, age 80, right hemisphere 104.7
2521 Female, age 94, right hemisphere 104.3
1841 Female, age 85, right hemisphere 100.8
2848 Male, age 76, right hemisphere 69.8
Subiculum
nTPM: 61.4
1901 Male, age 80, both hemispheres 82.9
1977 Female, age 85, both hemispheres 76.7
2729 Female, age 91, right hemisphere 70.7
2042 Male, age 76, both hemispheres 50.3
2438 Female, age 94, left hemisphere 44.9
2619 Male, age 74, both hemispheres 42.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.0
Samples: 197

Max nTPM: 50.8
Min nTPM: 0.9
Std nTPM: 11.8
Median nTPM: 18.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 50.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 50.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 47.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 44.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 42.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 42.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 41.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 41.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 40.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 39.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.0
FF:10169-103B7 60 years, female 43.6
FF:10153-102I9 76 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.4
Pig sample Sample description nTPM
Subiculum
nTPM: 25.0
Samples: 4

Max nTPM: 34.9
Min nTPM: 21.4
Sample A Female 34.9
Sample B Female 22.3
Sample C Male 21.5
Sample D Male 21.4
Dorsal hippocampus
nTPM: 64.4
Samples: 4

Max nTPM: 78.4
Min nTPM: 31.4
Sample A Female 77.1
Sample B Female 70.7
Sample C Male 31.4
Sample D Male 78.4
Entorhinal cortex
nTPM: 37.2
Samples: 4

Max nTPM: 44.9
Min nTPM: 30.5
Sample A Female 44.9
Sample B Female 37.0
Sample C Male 36.2
Sample D Male 30.5
Ventral hippocampus
nTPM: 39.9
Samples: 4

Max nTPM: 76.4
Min nTPM: 24.5
Sample A Female 30.4
Sample B Female 24.5
Sample C Male 28.2
Sample D Male 76.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 226.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.9
Samples: 4

Max nTPM: 128.3
Min nTPM: 108.1
Sample A Male 128.3
Sample B Male 108.1
Sample C Female 124.2
Sample D Female 123.1
Hippocampal formation
nTPM: 226.0
Samples: 4

Max nTPM: 278.7
Min nTPM: 188.2
Sample A Male 189.7
Sample B Male 247.2
Sample C Female 278.7
Sample D Female 188.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.3
70743898 Antisense, RP_050725_02_A04, Mouse strain C57BL/6J (56 days, male) 17.8
75695669 Antisense, RP_060518_04_D08, Mouse strain C57BL/6J (56 days, male) 16.9

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