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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
20.0
nTPM
Monaco:
86.5
nTPM
Schmiedel:
16.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
20.0
HPA sample
nTPM
gdT-cell nTPM: 20.0
Samples: 6
Max nTPM: 23.2
Min nTPM: 18.0
P10809_1007
19.8
P10809_1022
23.2
P10809_1041
18.0
P10809_1060
20.8
P10809_1077
19.4
P10809_1098
18.8
MAIT T-cell nTPM: 14.2
Samples: 6
Max nTPM: 18.6
Min nTPM: 9.9
P10809_1006
18.6
P10809_1024
9.9
P10809_1043
15.6
P10809_1062
12.3
P10809_1083
16.0
P10809_1097
12.7
Memory CD4 T-cell nTPM: 5.9
Samples: 6
Max nTPM: 10.0
Min nTPM: 3.4
P10809_1014
4.3
P10809_1026
5.9
P10809_1045
3.4
P10809_1064
7.7
P10809_1086
10.0
P10809_1113
3.8
Memory CD8 T-cell nTPM: 14.3
Samples: 5
Max nTPM: 18.1
Min nTPM: 12.5
P10809_1012
12.7
P10809_1027
18.1
P10809_1046
13.1
P10809_1065
12.5
P10809_1111
15.0
Naive CD4 T-cell nTPM: 4.3
Samples: 6
Max nTPM: 6.8
Min nTPM: 2.3
P10809_1015
4.1
P10809_1030
6.8
P10809_1049
2.3
P10809_1068
3.3
P10809_1085
6.8
P10809_1112
2.6
Naive CD8 T-cell nTPM: 8.9
Samples: 6
Max nTPM: 17.9
Min nTPM: 3.3
P10809_1016
5.8
P10809_1031
3.3
P10809_1050
9.1
P10809_1069
10.0
P10809_1087
17.9
P10809_1110
7.3
T-reg nTPM: 2.7
Samples: 6
Max nTPM: 4.4
Min nTPM: 1.0
P10809_1018
3.4
P10809_1037
1.9
P10809_1056
3.3
P10809_1075
1.0
P10809_1094
4.4
P10809_1106
1.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
86.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 24.1
Samples: 4
Max nTPM: 25.4
Min nTPM: 21.1
RHH5202_R3573
25.4
RHH5230_R3602
25.0
RHH5259_R3631
21.1
RHH5288_R3660
25.0
Effector memory CD8 T-cell nTPM: 62.6
Samples: 4
Max nTPM: 74.7
Min nTPM: 46.5
RHH5203_R3574
46.5
RHH5231_R3603
62.9
RHH5260_R3632
66.4
RHH5289_R3661
74.7
MAIT T-cell nTPM: 34.1
Samples: 4
Max nTPM: 37.5
Min nTPM: 28.3
RHH5233_R3605
36.9
RHH5205_R3576
28.3
RHH5262_R3634
33.5
RHH5297_R3663
37.5
Memory CD4 T-cell TFH nTPM: 14.1
Samples: 4
Max nTPM: 17.7
Min nTPM: 8.9
RHH5300_R3666
14.5
RHH5236_R3608
17.7
RHH5265_R3637
15.2
RHH5208_R3579
8.9
Memory CD4 T-cell Th1 nTPM: 16.4
Samples: 4
Max nTPM: 21.9
Min nTPM: 12.0
RHH5210_R3581
12.0
RHH5302_R3668
15.9
RHH5238_R3610
21.9
RHH5267_R3639
15.8
Memory CD4 T-cell Th1/Th17 nTPM: 24.1
Samples: 4
Max nTPM: 29.1
Min nTPM: 19.6
RHH5303_R3669
19.6
RHH5211_R3582
27.8
RHH5239_R3611
20.0
RHH5268_R3640
29.1
Memory CD4 T-cell Th17 nTPM: 16.7
Samples: 4
Max nTPM: 20.7
Min nTPM: 9.7
RHH5304_R3670
20.7
RHH5212_R3583
9.7
RHH5240_R3612
19.6
RHH5269_R3641
16.9
Memory CD4 T-cell Th2 nTPM: 17.5
Samples: 4
Max nTPM: 23.4
Min nTPM: 9.4
RHH5305_R3671
17.4
RHH5213_R3584
9.4
RHH5241_R3613
19.8
RHH5270_R3642
23.4
Naive CD4 T-cell nTPM: 13.4
Samples: 4
Max nTPM: 18.5
Min nTPM: 9.2
RHH5306_R3672
14.9
RHH5214_R3585
9.2
RHH5242_R3614
10.9
RHH5271_R3643
18.5
Naive CD8 T-cell nTPM: 12.3
Samples: 4
Max nTPM: 16.0
Min nTPM: 7.8
RHH5201_R3572
12.5
RHH5229_R3601
7.8
RHH5258_R3630
16.0
RHH5287_R3659
12.8
Non-Vd2 gdTCR nTPM: 86.5
Samples: 4
Max nTPM: 98.4
Min nTPM: 72.4
RHH5235_R3607
98.4
RHH5264_R3636
77.8
RHH5207_R3578
97.3
RHH5299_R3665
72.4
T-reg nTPM: 17.0
Samples: 4
Max nTPM: 25.5
Min nTPM: 11.9
RHH5301_R3667
14.3
RHH5237_R3609
16.4
RHH5266_R3638
25.5
RHH5209_R3580
11.9
Terminal effector memory CD4 T-cell nTPM: 67.4
Samples: 2
Max nTPM: 73.6
Min nTPM: 61.1
RHH5243_R3615
73.6
RHH5272_R3644
61.1
Terminal effector memory CD8 T-cell nTPM: 78.1
Samples: 4
Max nTPM: 86.4
Min nTPM: 64.8
RHH5232_R3604
81.9
RHH5204_R3575
64.8
RHH5261_R3633
86.4
RHH5296_R3662
79.2
Vd2 gdTCR nTPM: 52.5
Samples: 4
Max nTPM: 79.6
Min nTPM: 37.2
RHH5234_R3606
42.8
RHH5206_R3577
79.6
RHH5263_R3635
50.2
RHH5298_R3664
37.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
