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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
65.5
nTPM
Monaco:
105.4
nTPM
Schmiedel:
65.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.5
HPA sample
nTPM
gdT-cell nTPM: 54.6
Samples: 6
Max nTPM: 78.9
Min nTPM: 36.6
P10809_1007
36.6
P10809_1022
42.0
P10809_1041
78.9
P10809_1060
60.0
P10809_1077
44.8
P10809_1098
65.2
MAIT T-cell nTPM: 54.4
Samples: 6
Max nTPM: 75.5
Min nTPM: 33.8
P10809_1006
33.8
P10809_1024
55.0
P10809_1043
58.4
P10809_1062
65.9
P10809_1083
37.9
P10809_1097
75.5
Memory CD4 T-cell nTPM: 41.1
Samples: 6
Max nTPM: 46.9
Min nTPM: 32.2
P10809_1014
32.2
P10809_1026
39.3
P10809_1045
46.8
P10809_1064
46.9
P10809_1086
36.6
P10809_1113
44.7
Memory CD8 T-cell nTPM: 51.4
Samples: 5
Max nTPM: 64.2
Min nTPM: 27.5
P10809_1012
42.0
P10809_1027
27.5
P10809_1046
64.2
P10809_1065
63.5
P10809_1111
59.6
Naive CD4 T-cell nTPM: 32.1
Samples: 6
Max nTPM: 47.5
Min nTPM: 17.7
P10809_1015
23.3
P10809_1030
17.7
P10809_1049
47.5
P10809_1068
24.1
P10809_1085
38.2
P10809_1112
41.6
Naive CD8 T-cell nTPM: 36.7
Samples: 6
Max nTPM: 46.4
Min nTPM: 23.2
P10809_1016
29.4
P10809_1031
23.2
P10809_1050
38.6
P10809_1069
40.8
P10809_1087
46.4
P10809_1110
41.5
T-reg nTPM: 65.5
Samples: 6
Max nTPM: 84.2
Min nTPM: 42.2
P10809_1018
58.9
P10809_1037
45.0
P10809_1056
42.2
P10809_1075
81.6
P10809_1094
84.2
P10809_1106
81.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
105.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 56.1
Samples: 4
Max nTPM: 66.5
Min nTPM: 36.9
RHH5202_R3573
60.2
RHH5230_R3602
60.9
RHH5259_R3631
36.9
RHH5288_R3660
66.5
Effector memory CD8 T-cell nTPM: 84.2
Samples: 4
Max nTPM: 100.8
Min nTPM: 72.5
RHH5203_R3574
85.3
RHH5231_R3603
78.2
RHH5260_R3632
72.5
RHH5289_R3661
100.8
MAIT T-cell nTPM: 88.0
Samples: 4
Max nTPM: 95.2
Min nTPM: 73.6
RHH5233_R3605
88.6
RHH5205_R3576
73.6
RHH5262_R3634
95.2
RHH5297_R3663
94.7
Memory CD4 T-cell TFH nTPM: 70.3
Samples: 4
Max nTPM: 102.1
Min nTPM: 55.7
RHH5300_R3666
64.4
RHH5236_R3608
102.1
RHH5265_R3637
55.7
RHH5208_R3579
59.0
Memory CD4 T-cell Th1 nTPM: 65.9
Samples: 4
Max nTPM: 85.9
Min nTPM: 42.9
RHH5210_R3581
55.3
RHH5302_R3668
85.9
RHH5238_R3610
42.9
RHH5267_R3639
79.3
Memory CD4 T-cell Th1/Th17 nTPM: 63.2
Samples: 4
Max nTPM: 77.8
Min nTPM: 48.3
RHH5303_R3669
77.8
RHH5211_R3582
69.3
RHH5239_R3611
48.3
RHH5268_R3640
57.3
Memory CD4 T-cell Th17 nTPM: 59.5
Samples: 4
Max nTPM: 75.8
Min nTPM: 51.3
RHH5304_R3670
56.6
RHH5212_R3583
75.8
RHH5240_R3612
54.4
RHH5269_R3641
51.3
Memory CD4 T-cell Th2 nTPM: 70.0
Samples: 4
Max nTPM: 80.1
Min nTPM: 49.1
RHH5305_R3671
76.3
RHH5213_R3584
80.1
RHH5241_R3613
74.3
RHH5270_R3642
49.1
Naive CD4 T-cell nTPM: 47.2
Samples: 4
Max nTPM: 60.3
Min nTPM: 25.6
RHH5306_R3672
47.4
RHH5214_R3585
55.4
RHH5242_R3614
25.6
RHH5271_R3643
60.3
Naive CD8 T-cell nTPM: 43.0
Samples: 4
Max nTPM: 65.0
Min nTPM: 20.4
RHH5201_R3572
47.8
RHH5229_R3601
20.4
RHH5258_R3630
65.0
RHH5287_R3659
38.8
Non-Vd2 gdTCR nTPM: 105.4
Samples: 4
Max nTPM: 135.2
Min nTPM: 86.2
RHH5235_R3607
86.2
RHH5264_R3636
135.2
RHH5207_R3578
90.2
RHH5299_R3665
109.9
T-reg nTPM: 74.3
Samples: 4
Max nTPM: 86.9
Min nTPM: 65.6
RHH5301_R3667
69.9
RHH5237_R3609
86.9
RHH5266_R3638
74.8
RHH5209_R3580
65.6
Terminal effector memory CD4 T-cell nTPM: 97.3
Samples: 2
Max nTPM: 106.1
Min nTPM: 88.5
RHH5243_R3615
106.1
RHH5272_R3644
88.5
Terminal effector memory CD8 T-cell nTPM: 103.9
Samples: 4
Max nTPM: 130.0
Min nTPM: 73.1
RHH5232_R3604
130.0
RHH5204_R3575
100.5
RHH5261_R3633
73.1
RHH5296_R3662
111.9
Vd2 gdTCR nTPM: 90.8
Samples: 4
Max nTPM: 95.5
Min nTPM: 85.8
RHH5234_R3606
95.5
RHH5206_R3577
94.5
RHH5263_R3635
85.8
RHH5298_R3664
87.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
