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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
498.8
nTPM
Monaco:
98.3
nTPM
Schmiedel:
3.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
498.8
HPA sample
nTPM
gdT-cell nTPM: 344.8
Samples: 6
Max nTPM: 549.7
Min nTPM: 192.6
P10809_1007
220.8
P10809_1022
451.2
P10809_1041
297.6
P10809_1060
356.6
P10809_1077
549.7
P10809_1098
192.6
MAIT T-cell nTPM: 332.1
Samples: 6
Max nTPM: 684.6
Min nTPM: 102.2
P10809_1006
102.2
P10809_1024
282.8
P10809_1043
289.4
P10809_1062
684.6
P10809_1083
382.2
P10809_1097
251.3
Memory CD4 T-cell nTPM: 433.7
Samples: 6
Max nTPM: 655.4
Min nTPM: 249.3
P10809_1014
249.3
P10809_1026
274.3
P10809_1045
325.3
P10809_1064
622.9
P10809_1086
655.4
P10809_1113
474.7
Memory CD8 T-cell nTPM: 285.5
Samples: 5
Max nTPM: 512.5
Min nTPM: 183.8
P10809_1012
183.8
P10809_1027
213.4
P10809_1046
329.6
P10809_1065
512.5
P10809_1111
188.1
Naive CD4 T-cell nTPM: 498.8
Samples: 6
Max nTPM: 786.9
Min nTPM: 319.9
P10809_1015
335.9
P10809_1030
319.9
P10809_1049
615.7
P10809_1068
786.9
P10809_1085
391.3
P10809_1112
543.0
Naive CD8 T-cell nTPM: 380.0
Samples: 6
Max nTPM: 503.0
Min nTPM: 259.1
P10809_1016
440.9
P10809_1031
259.1
P10809_1050
293.8
P10809_1069
484.4
P10809_1087
503.0
P10809_1110
298.6
T-reg nTPM: 324.2
Samples: 6
Max nTPM: 498.3
Min nTPM: 164.6
P10809_1018
212.9
P10809_1037
381.9
P10809_1056
205.3
P10809_1075
498.3
P10809_1094
481.9
P10809_1106
164.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 81.4
Samples: 4
Max nTPM: 159.8
Min nTPM: 28.7
RHH5202_R3573
28.7
RHH5230_R3602
106.1
RHH5259_R3631
159.8
RHH5288_R3660
30.9
Effector memory CD8 T-cell nTPM: 45.5
Samples: 4
Max nTPM: 59.7
Min nTPM: 17.7
RHH5203_R3574
59.7
RHH5231_R3603
17.7
RHH5260_R3632
56.1
RHH5289_R3661
48.6
MAIT T-cell nTPM: 45.4
Samples: 4
Max nTPM: 77.2
Min nTPM: 13.6
RHH5233_R3605
37.0
RHH5205_R3576
77.2
RHH5262_R3634
53.6
RHH5297_R3663
13.6
Memory CD4 T-cell TFH nTPM: 30.4
Samples: 4
Max nTPM: 48.6
Min nTPM: 19.3
RHH5300_R3666
27.3
RHH5236_R3608
26.5
RHH5265_R3637
48.6
RHH5208_R3579
19.3
Memory CD4 T-cell Th1 nTPM: 98.4
Samples: 4
Max nTPM: 196.6
Min nTPM: 19.3
RHH5210_R3581
19.3
RHH5302_R3668
24.4
RHH5238_R3610
196.6
RHH5267_R3639
153.1
Memory CD4 T-cell Th1/Th17 nTPM: 70.5
Samples: 4
Max nTPM: 141.0
Min nTPM: 10.5
RHH5303_R3669
19.2
RHH5211_R3582
10.5
RHH5239_R3611
111.3
RHH5268_R3640
141.0
Memory CD4 T-cell Th17 nTPM: 48.5
Samples: 4
Max nTPM: 92.1
Min nTPM: 9.4
RHH5304_R3670
53.1
RHH5212_R3583
9.4
RHH5240_R3612
39.4
RHH5269_R3641
92.1
Memory CD4 T-cell Th2 nTPM: 45.9
Samples: 4
Max nTPM: 77.8
Min nTPM: 9.0
RHH5305_R3671
55.6
RHH5213_R3584
9.0
RHH5241_R3613
41.1
RHH5270_R3642
77.8
Naive CD4 T-cell nTPM: 65.5
Samples: 4
Max nTPM: 104.8
Min nTPM: 23.3
RHH5306_R3672
63.5
RHH5214_R3585
23.3
RHH5242_R3614
70.4
RHH5271_R3643
104.8
Naive CD8 T-cell nTPM: 58.0
Samples: 4
Max nTPM: 90.5
Min nTPM: 28.6
RHH5201_R3572
36.1
RHH5229_R3601
76.6
RHH5258_R3630
28.6
RHH5287_R3659
90.5
Non-Vd2 gdTCR nTPM: 54.4
Samples: 4
Max nTPM: 109.2
Min nTPM: 17.2
RHH5235_R3607
109.2
RHH5264_R3636
28.9
RHH5207_R3578
62.1
RHH5299_R3665
17.2
T-reg nTPM: 45.8
Samples: 4
Max nTPM: 118.5
Min nTPM: 15.1
RHH5301_R3667
22.4
RHH5237_R3609
15.1
RHH5266_R3638
118.5
RHH5209_R3580
27.2
Terminal effector memory CD4 T-cell nTPM: 65.6
Samples: 2
Max nTPM: 93.9
Min nTPM: 37.3
RHH5243_R3615
93.9
RHH5272_R3644
37.3
Terminal effector memory CD8 T-cell nTPM: 37.1
Samples: 4
Max nTPM: 63.8
Min nTPM: 9.0
RHH5232_R3604
38.8
RHH5204_R3575
36.8
RHH5261_R3633
63.8
RHH5296_R3662
9.0
Vd2 gdTCR nTPM: 52.0
Samples: 4
Max nTPM: 87.4
Min nTPM: 15.3
RHH5234_R3606
46.2
RHH5206_R3577
87.4
RHH5263_R3635
59.1
RHH5298_R3664
15.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
