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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
11.3
nTPM
HPA:
9.2
nTPM
GTEx:
11.3
nTPM
FANTOM5:
21.5
Scaled Tags Per Million
SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis
SMALL INTESTINE - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPM
9.2
Male, age 65
Small intestine sample 232 nTPM: 8.6
Cell types%
Glandular cells:
55
Smooth muscle cells:
5
Other cell types:
40
Male, age 39
Small intestine sample 233 nTPM: 10.7
Cell types%
Glandular cells:
40
Smooth muscle cells:
5
Other cell types:
55
Male, age 68
Small intestine sample 234 nTPM: 9.1
Cell types%
Glandular cells:
30
Smooth muscle cells:
15
Other cell types:
55
Male, age 85
Small intestine sample 235 nTPM: 8.5
SMALL INTESTINE - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
11.3
GTEx sample id
Sample description
nTPM
Small Intestine - Terminal Ileum Average nTPM: 11.3
Samples: 187
Max nTPM: 24.6
Min nTPM: 4.3
Std nTPM: 3.6
Median nTPM: 10.9
GTEX-Y111-2226-SM-4SOJB
50-59 years, male
24.6
GTEX-1CB4F-1826-SM-7MGXI
60-69 years, male
23.0
GTEX-Y5V5-1826-SM-4VDS5
60-69 years, female
21.8
GTEX-1LBAC-1526-SM-CXZKU
20-29 years, male
19.8
GTEX-1JJE9-2226-SM-CXZJM
70-79 years, male
19.7
GTEX-1GMR3-2726-SM-7MKFB
40-49 years, male
19.0
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
18.9
GTEX-1R9JW-1926-SM-EVR4J
30-39 years, female
18.6
GTEX-131XE-0926-SM-5HL7J
50-59 years, male
18.0
GTEX-1RAZR-1826-SM-E6CRE
40-49 years, male
17.9
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
17.8
GTEX-1LGOU-1426-SM-D3L8N
20-29 years, female
17.7
GTEX-14C39-1826-SM-5ZZW4
40-49 years, male
17.5
GTEX-17HHE-1726-SM-79OKT
50-59 years, male
17.5
GTEX-1H1DE-1426-SM-9JGHV
20-29 years, male
16.9
GTEX-11LCK-1926-SM-5A5KE
30-39 years, male
16.4
GTEX-18A66-2526-SM-7KFTZ
60-69 years, male
16.3
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
16.0
GTEX-183FY-1626-SM-793D8
20-29 years, male
16.0
GTEX-1R9PM-1626-SM-DPRY9
20-29 years, male
15.8
GTEX-1RAZQ-2226-SM-DPRZR
30-39 years, male
15.8
GTEX-1QP28-1726-SM-E6CRK
50-59 years, female
15.7
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
15.6
GTEX-1F75I-2526-SM-9WPOZ
40-49 years, male
15.5
GTEX-1HSMQ-2226-SM-C1YRD
50-59 years, male
15.5
GTEX-WFON-1526-SM-4LVMP
40-49 years, male
15.4
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
15.3
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
15.3
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
15.1
GTEX-1H11D-2526-SM-9JGGU
40-49 years, male
15.1
GTEX-17MFQ-1026-SM-7KFSZ
20-29 years, male
15.0
GTEX-1MGNQ-2326-SM-EV7BG
40-49 years, male
14.7
GTEX-1JMQK-2426-SM-CXZJU
60-69 years, male
14.5
GTEX-18QFQ-1626-SM-72D7H
30-39 years, male
14.4
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
14.2
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
14.2
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
14.0
GTEX-15DZA-0826-SM-6AJBF
30-39 years, female
13.9
GTEX-17KNJ-1626-SM-718AL
50-59 years, male
13.9
GTEX-1EMGI-2826-SM-7IGMR
60-69 years, male
13.9
GTEX-1BAJH-2526-SM-7IGOT
70-79 years, male
13.8
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
13.7
GTEX-1R7EV-1226-SM-DTX82
40-49 years, male
13.7
GTEX-1S5ZA-1326-SM-EV7BB
20-29 years, male
13.7
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
13.6
GTEX-1497J-1926-SM-5TDCC
60-69 years, male
13.6
GTEX-ZAB5-1526-SM-5HL9P
50-59 years, male
13.6
GTEX-1QW4Y-1226-SM-EWRMY
30-39 years, male
13.4
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
13.3
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
13.3
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
13.3
GTEX-1AX8Z-2526-SM-731E3
60-69 years, male
13.2
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
13.1
GTEX-1192X-2526-SM-59868
50-59 years, male
13.0
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
13.0
GTEX-1PDJ9-1826-SM-E9U66
20-29 years, male
13.0
GTEX-XPVG-1726-SM-4B65W
50-59 years, male
12.9
GTEX-1RAZA-1826-SM-DTXA2
20-29 years, male
12.9
GTEX-13NYB-1826-SM-5J1N3
40-49 years, male
12.8
GTEX-16AAH-1426-SM-7KFTR
50-59 years, male
12.8
GTEX-117YX-0326-SM-5GICL
50-59 years, male
12.7
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
12.7
GTEX-1OJC3-1626-SM-E9U65
20-29 years, male
12.7
GTEX-1QCLZ-2126-SM-EWRNC
60-69 years, female
12.7
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
12.6
GTEX-1B8KZ-1126-SM-7IGLX
50-59 years, male
12.6
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
12.4
GTEX-16A39-1426-SM-6LLI6
30-39 years, female
12.4
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
12.3
GTEX-1GL5R-2026-SM-7MKHP
50-59 years, male
12.3
GTEX-1R9K4-2326-SM-E6CRB
60-69 years, male
12.3
GTEX-1R9K5-2026-SM-E6CPS
50-59 years, male
12.2
GTEX-Y3I4-1326-SM-4TT8Z
50-59 years, male
12.1
GTEX-1K9T9-2726-SM-D4P3E
50-59 years, female
11.9
GTEX-1PIEJ-1526-SM-E6CP8
20-29 years, female
11.8
GTEX-1I1GT-1826-SM-ARZLW
60-69 years, female
11.7
GTEX-13113-1226-SM-5EGHT
60-69 years, female
11.6
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
11.6
GTEX-1J8QM-1026-SM-C1YQA
60-69 years, female
11.6
GTEX-1LH75-1926-SM-DIPGD
50-59 years, female
11.6
GTEX-1L5NE-1826-SM-EV79T
50-59 years, male
11.5
GTEX-ZG7Y-1926-SM-DNZZ5
50-59 years, male
11.5
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
11.4
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
11.4
GTEX-1MUQO-2426-SM-EAZ5A
60-69 years, male
11.4
GTEX-1QPFJ-2626-SM-DPRZU
30-39 years, female
11.4
GTEX-14PJN-0826-SM-686ZL
30-39 years, male
11.3
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
11.2
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
11.2
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
11.2
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
11.0
GTEX-13111-1426-SM-5DUW3
50-59 years, male
10.9
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
10.9
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
10.9
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
10.8
GTEX-13O61-1326-SM-5KM31
60-69 years, male
10.8
GTEX-1JN76-1126-SM-C1YRL
20-29 years, female
10.8
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
10.7
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
10.6
GTEX-WHSB-1026-SM-4M1XN
50-59 years, male
10.6
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
10.6
GTEX-1OKEX-1126-SM-DTXEB
60-69 years, male
10.6
GTEX-14BMU-1426-SM-5TDE5
20-29 years, female
10.5
GTEX-16NGA-1126-SM-7KFSY
40-49 years, female
10.5
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
10.4
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
10.4
GTEX-15EU6-1826-SM-7PC1W
50-59 years, male
10.4
GTEX-11TUW-1926-SM-5BC58
60-69 years, male
10.3
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
10.3
GTEX-1J8Q3-2526-SM-CNNQ4
60-69 years, male
10.3
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
10.1
GTEX-1NSGN-2126-SM-DPRYN
50-59 years, male
10.1
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
10.0
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
10.0
GTEX-1S82Z-1826-SM-E9TIK
30-39 years, female
10.0
GTEX-1QP2A-2426-SM-EXOJA
50-59 years, male
9.9
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
9.8
GTEX-1122O-1326-SM-5H11F
60-69 years, female
9.7
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
9.6
GTEX-144GM-1026-SM-79OKU
20-29 years, male
9.6
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
9.6
GTEX-1C64O-2526-SM-79ONO
60-69 years, male
9.4
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
9.4
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
9.3
GTEX-1B8KE-1726-SM-7IGMN
50-59 years, male
9.2
GTEX-1CAMR-0826-SM-7MKFK
20-29 years, male
9.1
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
9.1
GTEX-1IKOE-1926-SM-ARU7V
30-39 years, female
9.1
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
9.0
GTEX-1KXAM-2026-SM-DHXKI
60-69 years, male
9.0
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
8.9
GTEX-14PN3-2026-SM-68729
60-69 years, female
8.9
GTEX-1GMR2-1026-SM-7MKHJ
50-59 years, male
8.9
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
8.9
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
8.7
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
8.6
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
8.5
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
8.5
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
8.5
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
8.5
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
8.5
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
8.4
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
8.3
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
8.3
GTEX-1R7EU-1326-SM-E6CQ6
60-69 years, male
8.3
GTEX-ZDTT-1726-SM-5HL69
60-69 years, male
8.3
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
8.2
GTEX-ZF29-1626-SM-4WKFJ
60-69 years, female
8.1
GTEX-14PJ6-1726-SM-6AJBN
60-69 years, female
8.0
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
7.9
GTEX-WYJK-1526-SM-4ONCW
50-59 years, male
7.9
GTEX-ZLWG-1626-SM-DNZZ1
50-59 years, female
7.9
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
7.8
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
7.8
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
7.8
GTEX-14XAO-1926-SM-6ETZO
60-69 years, female
7.7
GTEX-15G1A-1726-SM-6LPI4
30-39 years, male
7.7
GTEX-1C475-1426-SM-793CH
40-49 years, female
7.6
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
7.5
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
7.4
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
7.4
GTEX-14PKU-1626-SM-6871C
40-49 years, female
7.4
GTEX-1AMFI-1926-SM-731F2
50-59 years, female
7.3
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
7.2
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
7.2
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
7.1
GTEX-14PJ3-1326-SM-664O7
50-59 years, male
7.1
GTEX-14PKV-2026-SM-6AJ9A
20-29 years, female
7.1
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
7.1
GTEX-1CAMS-2426-SM-7DHMV
40-49 years, female
7.0
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
7.0
GTEX-WY7C-1826-SM-4ONCE
50-59 years, male
6.8
GTEX-1JK1U-1226-SM-CNNPN
60-69 years, male
6.8
GTEX-111YS-1426-SM-5GID8
60-69 years, male
6.6
GTEX-ZTSS-0926-SM-59865
40-49 years, male
6.6
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
6.5
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
6.4
GTEX-YFCO-1326-SM-664NV
40-49 years, male
6.1
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
6.1
GTEX-16MTA-1526-SM-6LPJB
50-59 years, male
5.8
GTEX-13W3W-2026-SM-5K7UL
60-69 years, female
5.5
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
5.5
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
5.5
GTEX-13X6H-1826-SM-7EWCZ
50-59 years, female
5.3
GTEX-14PK6-1626-SM-6871I
70-79 years, female
5.2
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
4.8
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
4.3
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SMALL INTESTINE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
