We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.8
nTPM
Monaco:
87.9
nTPM
Schmiedel:
64.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.8
HPA sample
nTPM
gdT-cell nTPM: 35.8
Samples: 6
Max nTPM: 46.4
Min nTPM: 20.1
P10809_1007
20.1
P10809_1022
46.4
P10809_1041
29.7
P10809_1060
39.8
P10809_1077
34.1
P10809_1098
44.8
MAIT T-cell nTPM: 26.5
Samples: 6
Max nTPM: 36.9
Min nTPM: 14.4
P10809_1006
23.7
P10809_1024
14.4
P10809_1043
29.9
P10809_1062
25.4
P10809_1083
36.9
P10809_1097
28.5
Memory CD4 T-cell nTPM: 32.8
Samples: 6
Max nTPM: 40.0
Min nTPM: 27.3
P10809_1014
27.3
P10809_1026
40.0
P10809_1045
30.4
P10809_1064
33.8
P10809_1086
31.5
P10809_1113
33.7
Memory CD8 T-cell nTPM: 32.9
Samples: 5
Max nTPM: 46.5
Min nTPM: 26.4
P10809_1012
28.0
P10809_1027
26.4
P10809_1046
46.5
P10809_1065
27.8
P10809_1111
35.6
Naive CD4 T-cell nTPM: 29.0
Samples: 6
Max nTPM: 34.9
Min nTPM: 19.3
P10809_1015
19.3
P10809_1030
34.9
P10809_1049
32.8
P10809_1068
28.5
P10809_1085
26.4
P10809_1112
31.9
Naive CD8 T-cell nTPM: 28.5
Samples: 6
Max nTPM: 36.9
Min nTPM: 18.2
P10809_1016
18.2
P10809_1031
36.9
P10809_1050
29.7
P10809_1069
34.3
P10809_1087
23.5
P10809_1110
28.2
T-reg nTPM: 49.9
Samples: 6
Max nTPM: 82.8
Min nTPM: 34.2
P10809_1018
44.5
P10809_1037
38.6
P10809_1056
82.8
P10809_1075
37.2
P10809_1094
61.8
P10809_1106
34.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 67.7
Samples: 4
Max nTPM: 99.8
Min nTPM: 40.1
RHH5202_R3573
50.6
RHH5230_R3602
80.4
RHH5259_R3631
40.1
RHH5288_R3660
99.8
Effector memory CD8 T-cell nTPM: 77.8
Samples: 4
Max nTPM: 84.3
Min nTPM: 73.4
RHH5203_R3574
73.4
RHH5231_R3603
84.3
RHH5260_R3632
76.1
RHH5289_R3661
77.5
MAIT T-cell nTPM: 64.7
Samples: 4
Max nTPM: 78.5
Min nTPM: 56.2
RHH5233_R3605
58.2
RHH5205_R3576
65.9
RHH5262_R3634
56.2
RHH5297_R3663
78.5
Memory CD4 T-cell TFH nTPM: 73.3
Samples: 4
Max nTPM: 100.1
Min nTPM: 48.0
RHH5300_R3666
100.1
RHH5236_R3608
81.6
RHH5265_R3637
63.3
RHH5208_R3579
48.0
Memory CD4 T-cell Th1 nTPM: 73.2
Samples: 4
Max nTPM: 93.8
Min nTPM: 48.7
RHH5210_R3581
65.3
RHH5302_R3668
93.8
RHH5238_R3610
48.7
RHH5267_R3639
85.0
Memory CD4 T-cell Th1/Th17 nTPM: 69.7
Samples: 4
Max nTPM: 84.1
Min nTPM: 47.6
RHH5303_R3669
84.1
RHH5211_R3582
76.5
RHH5239_R3611
47.6
RHH5268_R3640
70.4
Memory CD4 T-cell Th17 nTPM: 71.6
Samples: 4
Max nTPM: 94.3
Min nTPM: 62.1
RHH5304_R3670
94.3
RHH5212_R3583
65.3
RHH5240_R3612
62.1
RHH5269_R3641
64.5
Memory CD4 T-cell Th2 nTPM: 87.9
Samples: 4
Max nTPM: 111.7
Min nTPM: 64.5
RHH5305_R3671
111.7
RHH5213_R3584
96.5
RHH5241_R3613
64.5
RHH5270_R3642
78.9
Naive CD4 T-cell nTPM: 67.3
Samples: 4
Max nTPM: 99.3
Min nTPM: 51.5
RHH5306_R3672
99.3
RHH5214_R3585
62.7
RHH5242_R3614
51.5
RHH5271_R3643
55.8
Naive CD8 T-cell nTPM: 51.4
Samples: 4
Max nTPM: 70.7
Min nTPM: 35.4
RHH5201_R3572
35.7
RHH5229_R3601
35.4
RHH5258_R3630
63.6
RHH5287_R3659
70.7
Non-Vd2 gdTCR nTPM: 80.0
Samples: 4
Max nTPM: 100.5
Min nTPM: 55.4
RHH5235_R3607
55.4
RHH5264_R3636
92.3
RHH5207_R3578
71.9
RHH5299_R3665
100.5
T-reg nTPM: 82.4
Samples: 4
Max nTPM: 95.7
Min nTPM: 67.8
RHH5301_R3667
95.7
RHH5237_R3609
86.0
RHH5266_R3638
80.1
RHH5209_R3580
67.8
Terminal effector memory CD4 T-cell nTPM: 70.4
Samples: 2
Max nTPM: 72.4
Min nTPM: 68.3
RHH5243_R3615
68.3
RHH5272_R3644
72.4
Terminal effector memory CD8 T-cell nTPM: 74.5
Samples: 4
Max nTPM: 83.7
Min nTPM: 66.0
RHH5232_R3604
66.0
RHH5204_R3575
77.5
RHH5261_R3633
83.7
RHH5296_R3662
70.9
Vd2 gdTCR nTPM: 83.8
Samples: 4
Max nTPM: 90.7
Min nTPM: 80.4
RHH5234_R3606
80.4
RHH5206_R3577
83.4
RHH5263_R3635
80.7
RHH5298_R3664
90.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
