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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
52.4
nTPM
Monaco:
222.7
nTPM
Schmiedel:
136.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
52.4
HPA sample
nTPM
gdT-cell nTPM: 27.7
Samples: 6
Max nTPM: 53.0
Min nTPM: 18.5
P10809_1007
53.0
P10809_1022
25.6
P10809_1041
25.7
P10809_1060
18.5
P10809_1077
22.3
P10809_1098
21.3
MAIT T-cell nTPM: 44.7
Samples: 6
Max nTPM: 75.8
Min nTPM: 33.7
P10809_1006
75.8
P10809_1024
33.7
P10809_1043
40.0
P10809_1062
38.4
P10809_1083
40.2
P10809_1097
39.8
Memory CD4 T-cell nTPM: 42.4
Samples: 6
Max nTPM: 81.4
Min nTPM: 24.2
P10809_1014
81.4
P10809_1026
47.3
P10809_1045
37.7
P10809_1064
28.8
P10809_1086
24.2
P10809_1113
35.2
Memory CD8 T-cell nTPM: 35.7
Samples: 5
Max nTPM: 56.8
Min nTPM: 22.2
P10809_1012
56.8
P10809_1027
40.8
P10809_1046
27.1
P10809_1065
22.2
P10809_1111
31.4
Naive CD4 T-cell nTPM: 48.3
Samples: 6
Max nTPM: 99.1
Min nTPM: 35.8
P10809_1015
99.1
P10809_1030
35.9
P10809_1049
40.6
P10809_1068
42.2
P10809_1085
35.9
P10809_1112
35.8
Naive CD8 T-cell nTPM: 41.9
Samples: 6
Max nTPM: 96.2
Min nTPM: 22.9
P10809_1016
96.2
P10809_1031
31.5
P10809_1050
37.1
P10809_1069
22.9
P10809_1087
23.0
P10809_1110
40.9
T-reg nTPM: 52.4
Samples: 6
Max nTPM: 70.2
Min nTPM: 26.6
P10809_1018
66.4
P10809_1037
70.2
P10809_1056
47.9
P10809_1075
41.9
P10809_1094
61.5
P10809_1106
26.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
222.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 180.9
Samples: 4
Max nTPM: 222.2
Min nTPM: 120.1
RHH5202_R3573
199.4
RHH5230_R3602
222.2
RHH5259_R3631
120.1
RHH5288_R3660
181.9
Effector memory CD8 T-cell nTPM: 168.8
Samples: 4
Max nTPM: 235.2
Min nTPM: 103.4
RHH5203_R3574
235.2
RHH5231_R3603
183.1
RHH5260_R3632
153.3
RHH5289_R3661
103.4
MAIT T-cell nTPM: 181.0
Samples: 4
Max nTPM: 203.3
Min nTPM: 152.6
RHH5233_R3605
203.3
RHH5205_R3576
169.5
RHH5262_R3634
152.6
RHH5297_R3663
198.5
Memory CD4 T-cell TFH nTPM: 179.8
Samples: 4
Max nTPM: 209.9
Min nTPM: 149.0
RHH5300_R3666
181.4
RHH5236_R3608
179.0
RHH5265_R3637
149.0
RHH5208_R3579
209.9
Memory CD4 T-cell Th1 nTPM: 168.0
Samples: 4
Max nTPM: 234.4
Min nTPM: 118.8
RHH5210_R3581
195.3
RHH5302_R3668
234.4
RHH5238_R3610
123.5
RHH5267_R3639
118.8
Memory CD4 T-cell Th1/Th17 nTPM: 178.5
Samples: 4
Max nTPM: 242.5
Min nTPM: 127.6
RHH5303_R3669
212.7
RHH5211_R3582
242.5
RHH5239_R3611
131.3
RHH5268_R3640
127.6
Memory CD4 T-cell Th17 nTPM: 212.1
Samples: 4
Max nTPM: 265.0
Min nTPM: 141.5
RHH5304_R3670
265.0
RHH5212_R3583
246.3
RHH5240_R3612
195.6
RHH5269_R3641
141.5
Memory CD4 T-cell Th2 nTPM: 205.6
Samples: 4
Max nTPM: 261.6
Min nTPM: 161.7
RHH5305_R3671
261.6
RHH5213_R3584
198.2
RHH5241_R3613
200.9
RHH5270_R3642
161.7
Naive CD4 T-cell nTPM: 204.4
Samples: 4
Max nTPM: 249.6
Min nTPM: 172.5
RHH5306_R3672
249.6
RHH5214_R3585
172.5
RHH5242_R3614
210.6
RHH5271_R3643
184.8
Naive CD8 T-cell nTPM: 222.8
Samples: 4
Max nTPM: 267.6
Min nTPM: 185.8
RHH5201_R3572
267.6
RHH5229_R3601
185.8
RHH5258_R3630
219.1
RHH5287_R3659
218.5
Non-Vd2 gdTCR nTPM: 159.5
Samples: 4
Max nTPM: 216.7
Min nTPM: 131.6
RHH5235_R3607
135.3
RHH5264_R3636
216.7
RHH5207_R3578
154.5
RHH5299_R3665
131.6
T-reg nTPM: 157.2
Samples: 4
Max nTPM: 184.7
Min nTPM: 126.7
RHH5301_R3667
184.7
RHH5237_R3609
150.0
RHH5266_R3638
167.4
RHH5209_R3580
126.7
Terminal effector memory CD4 T-cell nTPM: 138.1
Samples: 2
Max nTPM: 143.6
Min nTPM: 132.6
RHH5243_R3615
143.6
RHH5272_R3644
132.6
Terminal effector memory CD8 T-cell nTPM: 154.1
Samples: 4
Max nTPM: 156.5
Min nTPM: 151.6
RHH5232_R3604
151.6
RHH5204_R3575
156.3
RHH5261_R3633
152.1
RHH5296_R3662
156.5
Vd2 gdTCR nTPM: 212.3
Samples: 4
Max nTPM: 257.6
Min nTPM: 162.2
RHH5234_R3606
225.9
RHH5206_R3577
257.6
RHH5263_R3635
203.4
RHH5298_R3664
162.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
