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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.1
nTPM
Monaco:
156.5
nTPM
Schmiedel:
127.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.1
HPA sample
nTPM
gdT-cell nTPM: 26.6
Samples: 6
Max nTPM: 33.4
Min nTPM: 22.9
P10809_1007
22.9
P10809_1022
33.4
P10809_1041
29.1
P10809_1060
24.5
P10809_1077
23.1
P10809_1098
26.4
MAIT T-cell nTPM: 26.4
Samples: 6
Max nTPM: 37.7
Min nTPM: 20.4
P10809_1006
24.0
P10809_1024
37.7
P10809_1043
20.4
P10809_1062
22.0
P10809_1083
33.8
P10809_1097
20.4
Memory CD4 T-cell nTPM: 21.9
Samples: 6
Max nTPM: 27.6
Min nTPM: 16.7
P10809_1014
26.7
P10809_1026
19.3
P10809_1045
20.1
P10809_1064
16.7
P10809_1086
27.6
P10809_1113
21.0
Memory CD8 T-cell nTPM: 29.7
Samples: 5
Max nTPM: 33.6
Min nTPM: 26.2
P10809_1012
30.8
P10809_1027
26.2
P10809_1046
31.1
P10809_1065
26.7
P10809_1111
33.6
Naive CD4 T-cell nTPM: 15.0
Samples: 6
Max nTPM: 21.3
Min nTPM: 11.3
P10809_1015
19.5
P10809_1030
13.3
P10809_1049
13.2
P10809_1068
11.6
P10809_1085
21.3
P10809_1112
11.3
Naive CD8 T-cell nTPM: 22.8
Samples: 6
Max nTPM: 31.1
Min nTPM: 17.5
P10809_1016
17.5
P10809_1031
19.1
P10809_1050
24.3
P10809_1069
26.1
P10809_1087
31.1
P10809_1110
18.8
T-reg nTPM: 44.1
Samples: 6
Max nTPM: 54.7
Min nTPM: 31.0
P10809_1018
42.6
P10809_1037
54.7
P10809_1056
40.7
P10809_1075
31.0
P10809_1094
46.3
P10809_1106
49.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
156.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 111.7
Samples: 4
Max nTPM: 139.3
Min nTPM: 82.6
RHH5202_R3573
129.1
RHH5230_R3602
82.6
RHH5259_R3631
139.3
RHH5288_R3660
95.9
Effector memory CD8 T-cell nTPM: 150.8
Samples: 4
Max nTPM: 170.2
Min nTPM: 129.9
RHH5203_R3574
170.2
RHH5231_R3603
129.9
RHH5260_R3632
147.4
RHH5289_R3661
155.8
MAIT T-cell nTPM: 102.3
Samples: 4
Max nTPM: 152.8
Min nTPM: 82.4
RHH5233_R3605
82.4
RHH5205_R3576
152.8
RHH5262_R3634
89.9
RHH5297_R3663
83.9
Memory CD4 T-cell TFH nTPM: 84.7
Samples: 4
Max nTPM: 99.0
Min nTPM: 66.9
RHH5300_R3666
66.9
RHH5236_R3608
85.5
RHH5265_R3637
87.2
RHH5208_R3579
99.0
Memory CD4 T-cell Th1 nTPM: 99.6
Samples: 4
Max nTPM: 108.9
Min nTPM: 84.2
RHH5210_R3581
107.3
RHH5302_R3668
84.2
RHH5238_R3610
98.1
RHH5267_R3639
108.9
Memory CD4 T-cell Th1/Th17 nTPM: 113.8
Samples: 4
Max nTPM: 123.3
Min nTPM: 95.9
RHH5303_R3669
95.9
RHH5211_R3582
113.2
RHH5239_R3611
123.3
RHH5268_R3640
122.7
Memory CD4 T-cell Th17 nTPM: 95.4
Samples: 4
Max nTPM: 109.4
Min nTPM: 76.9
RHH5304_R3670
76.9
RHH5212_R3583
92.7
RHH5240_R3612
109.4
RHH5269_R3641
102.7
Memory CD4 T-cell Th2 nTPM: 77.6
Samples: 4
Max nTPM: 85.1
Min nTPM: 69.8
RHH5305_R3671
71.6
RHH5213_R3584
83.9
RHH5241_R3613
69.8
RHH5270_R3642
85.1
Naive CD4 T-cell nTPM: 57.3
Samples: 4
Max nTPM: 68.9
Min nTPM: 49.3
RHH5306_R3672
52.8
RHH5214_R3585
68.9
RHH5242_R3614
49.3
RHH5271_R3643
58.0
Naive CD8 T-cell nTPM: 69.5
Samples: 4
Max nTPM: 82.2
Min nTPM: 61.6
RHH5201_R3572
71.6
RHH5229_R3601
82.2
RHH5258_R3630
62.7
RHH5287_R3659
61.6
Non-Vd2 gdTCR nTPM: 137.4
Samples: 4
Max nTPM: 164.6
Min nTPM: 115.1
RHH5235_R3607
117.1
RHH5264_R3636
152.8
RHH5207_R3578
164.6
RHH5299_R3665
115.1
T-reg nTPM: 93.0
Samples: 4
Max nTPM: 118.3
Min nTPM: 58.1
RHH5301_R3667
58.1
RHH5237_R3609
96.5
RHH5266_R3638
118.3
RHH5209_R3580
98.9
Terminal effector memory CD4 T-cell nTPM: 154.3
Samples: 2
Max nTPM: 157.6
Min nTPM: 150.9
RHH5243_R3615
150.9
RHH5272_R3644
157.6
Terminal effector memory CD8 T-cell nTPM: 156.5
Samples: 4
Max nTPM: 194.8
Min nTPM: 120.9
RHH5232_R3604
120.9
RHH5204_R3575
170.4
RHH5261_R3633
194.8
RHH5296_R3662
140.0
Vd2 gdTCR nTPM: 90.4
Samples: 4
Max nTPM: 104.1
Min nTPM: 65.3
RHH5234_R3606
96.4
RHH5206_R3577
95.6
RHH5263_R3635
104.1
RHH5298_R3664
65.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
