HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:10.4 nTPM
HPA Brain:61.9 nTPM
GTEx:10.4 nTPM
FANTOM5:58.4 Scaled Tags Per Million
Pig:61.9 nTPM
Mouse:38.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017950
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.9
Sample id Sample description nTPM
Hippocampus
nTPM: 38.7
1911 Female, age 85, right hemisphere 48.4
1898 Male, age 80, left hemisphere 44.8
1855 Male, age 76, left hemisphere 40.5
2148 Female, age 91, left hemisphere 36.6
2621 Female, age 67, right hemisphere 36.1
2529 Female, age 94, left hemisphere 25.6
Dentate gyrus
nTPM: 41.0
2531 Female, age 67, both hemispheres 48.7
1927 Female, age 91, both hemispheres 48.2
2246 Female, age 85, both hemispheres 44.7
2010 Male, age 76, both hemispheres 44.2
2528 Male, age 74, both hemispheres 31.2
2530 Female, age 94, left hemisphere 28.9
Entorhinal gyrus
nTPM: 40.9
2764 Male, age 80, right hemisphere 49.0
1938 Female, age 85, left hemisphere 48.5
1787 Male, age 76, left hemisphere 43.0
2613 Female, age 94, left hemisphere 40.2
2117 Female, age 91, right hemisphere 33.1
2686 Male, age 75, right hemisphere 31.7
Hippocampus, CA1
nTPM: 52.5
2749 Male, age 80, left hemisphere 77.7
2045 Male, age 76, both hemispheres 74.4
1873 Female, age 85, both hemispheres 43.5
2082 Female, age 91, right hemisphere 35.3
2527 Male, age 74, both hemispheres 31.4
Hippocampus, CA2
nTPM: 40.8
1940 Female, age 85, left hemisphere 57.3
1892 Male, age 76, both hemispheres 55.6
1963 Male, age 80, left hemisphere 36.5
2113 Female, age 91, right hemisphere 34.5
2249 Male, age 74, both hemispheres 31.8
2437 Female, age 94, left hemisphere 29.1
Hippocampus, CA3
nTPM: 56.1
2137 Male, age 80, left hemisphere 89.8
1867 Male, age 76, both hemispheres 67.9
2620 Female, age 94, left hemisphere 59.6
1891 Female, age 85, both hemispheres 45.6
2861 Female, age 67, both hemispheres 39.6
2436 Male, age 74, both hemispheres 34.2
Parahippocampal cortex
nTPM: 46.5
2693 Female, age 94, both hemispheres 58.2
2532 Female, age 72, left hemisphere 57.5
1850 Male, age 80, both hemispheres 56.6
1933 Female, age 85, both hemispheres 53.7
2018 Male, age 76, both hemispheres 45.7
2245 Female, age 91, both hemispheres 45.5
2250 Female, age 67, right hemisphere 43.3
1990 Female, age 91, right hemisphere 40.7
2622 Female, age 67, right hemisphere 35.0
2692 Male, age 74, both hemispheres 29.3
Perirhinal gyrus
nTPM: 61.9
2521 Female, age 94, right hemisphere 84.2
1794 Male, age 80, right hemisphere 67.0
1841 Female, age 85, right hemisphere 58.3
1847 Female, age 91, left hemisphere 53.5
2848 Male, age 76, right hemisphere 46.6
Subiculum
nTPM: 42.2
1901 Male, age 80, both hemispheres 58.9
1977 Female, age 85, both hemispheres 51.8
2042 Male, age 76, both hemispheres 49.5
2729 Female, age 91, right hemisphere 32.9
2438 Female, age 94, left hemisphere 30.5
2619 Male, age 74, both hemispheres 29.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 23.7
Min nTPM: 4.3
Std nTPM: 3.3
Median nTPM: 10.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 23.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 20.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 20.3
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 18.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 18.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 17.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 16.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 16.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 16.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 16.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 15.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.4
FF:10169-103B7 60 years, female 79.9
FF:10153-102I9 76 years, female 36.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.9
Pig sample Sample description nTPM
Subiculum
nTPM: 36.6
Samples: 4

Max nTPM: 40.3
Min nTPM: 33.4
Sample A Female 40.3
Sample B Female 33.4
Sample C Male 37.8
Sample D Male 34.8
Dorsal hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 35.2
Min nTPM: 22.2
Sample A Female 35.2
Sample B Female 33.2
Sample C Male 34.2
Sample D Male 22.2
Entorhinal cortex
nTPM: 62.0
Samples: 4

Max nTPM: 65.2
Min nTPM: 54.4
Sample A Female 63.2
Sample B Female 65.2
Sample C Male 65.0
Sample D Male 54.4
Ventral hippocampus
nTPM: 31.4
Samples: 4

Max nTPM: 40.1
Min nTPM: 22.0
Sample A Female 26.2
Sample B Female 22.0
Sample C Male 37.3
Sample D Male 40.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.8
Samples: 4

Max nTPM: 42.7
Min nTPM: 31.6
Sample A Male 40.3
Sample B Male 40.6
Sample C Female 31.6
Sample D Female 42.7
Hippocampal formation
nTPM: 32.1
Samples: 4

Max nTPM: 40.7
Min nTPM: 26.9
Sample A Male 26.9
Sample B Male 33.6
Sample C Female 40.7
Sample D Female 27.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70787095 Antisense, RP_050706_03_F10, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org