HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:23.9 nTPM
HPA Brain:54.7 nTPM
GTEx:23.9 nTPM
FANTOM5:46.9 Scaled Tags Per Million
Pig:7.1 nTPM
Mouse:20.4 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005579
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.7
Sample id Sample description nTPM
Hippocampus
nTPM: 44.1
2529 Female, age 94, left hemisphere 46.2
2621 Female, age 67, right hemisphere 45.9
1898 Male, age 80, left hemisphere 45.6
1911 Female, age 85, right hemisphere 43.9
1855 Male, age 76, left hemisphere 43.3
2148 Female, age 91, left hemisphere 39.9
Dentate gyrus
nTPM: 46.1
2530 Female, age 94, left hemisphere 64.7
2010 Male, age 76, both hemispheres 49.4
2246 Female, age 85, both hemispheres 41.8
1927 Female, age 91, both hemispheres 41.5
2528 Male, age 74, both hemispheres 39.6
2531 Female, age 67, both hemispheres 39.5
Entorhinal gyrus
nTPM: 54.7
2764 Male, age 80, right hemisphere 63.0
2117 Female, age 91, right hemisphere 62.7
2613 Female, age 94, left hemisphere 52.5
1787 Male, age 76, left hemisphere 52.4
2686 Male, age 75, right hemisphere 52.1
1938 Female, age 85, left hemisphere 45.4
Hippocampus, CA1
nTPM: 42.9
2749 Male, age 80, left hemisphere 58.5
2527 Male, age 74, both hemispheres 41.8
1873 Female, age 85, both hemispheres 41.1
2082 Female, age 91, right hemisphere 37.8
2045 Male, age 76, both hemispheres 35.5
Hippocampus, CA2
nTPM: 50.3
2437 Female, age 94, left hemisphere 58.8
1963 Male, age 80, left hemisphere 57.2
1940 Female, age 85, left hemisphere 50.8
1892 Male, age 76, both hemispheres 47.0
2249 Male, age 74, both hemispheres 47.0
2113 Female, age 91, right hemisphere 41.1
Hippocampus, CA3
nTPM: 43.9
1867 Male, age 76, both hemispheres 59.3
2137 Male, age 80, left hemisphere 45.6
1891 Female, age 85, both hemispheres 45.5
2436 Male, age 74, both hemispheres 40.1
2861 Female, age 67, both hemispheres 37.8
2620 Female, age 94, left hemisphere 35.0
Parahippocampal cortex
nTPM: 46.4
2532 Female, age 72, left hemisphere 53.3
1990 Female, age 91, right hemisphere 51.9
2692 Male, age 74, both hemispheres 50.5
2245 Female, age 91, both hemispheres 47.4
1933 Female, age 85, both hemispheres 47.3
1850 Male, age 80, both hemispheres 43.8
2018 Male, age 76, both hemispheres 43.7
2622 Female, age 67, right hemisphere 43.2
2250 Female, age 67, right hemisphere 41.7
2693 Female, age 94, both hemispheres 40.7
Perirhinal gyrus
nTPM: 44.0
1794 Male, age 80, right hemisphere 49.6
2521 Female, age 94, right hemisphere 48.7
1847 Female, age 91, left hemisphere 42.9
1841 Female, age 85, right hemisphere 39.9
2848 Male, age 76, right hemisphere 38.7
Subiculum
nTPM: 54.7
2042 Male, age 76, both hemispheres 65.4
1901 Male, age 80, both hemispheres 58.8
2438 Female, age 94, left hemisphere 57.2
1977 Female, age 85, both hemispheres 55.6
2619 Male, age 74, both hemispheres 48.1
2729 Female, age 91, right hemisphere 42.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.9
Samples: 197

Max nTPM: 67.9
Min nTPM: 11.2
Std nTPM: 8.6
Median nTPM: 22.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 67.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 59.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 54.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 53.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 47.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 40.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 40.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 40.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 39.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 38.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.9
FF:10169-103B7 60 years, female 48.8
FF:10153-102I9 76 years, female 45.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.1
Pig sample Sample description nTPM
Subiculum
nTPM: 6.8
Samples: 4

Max nTPM: 9.6
Min nTPM: 5.7
Sample A Female 9.6
Sample B Female 5.7
Sample C Male 5.9
Sample D Male 6.1
Dorsal hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 9.9
Min nTPM: 4.2
Sample A Female 9.9
Sample B Female 7.0
Sample C Male 6.4
Sample D Male 4.2
Entorhinal cortex
nTPM: 6.7
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.7
Sample A Female 7.7
Sample B Female 5.7
Sample C Male 7.1
Sample D Male 6.3
Ventral hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 9.3
Min nTPM: 4.3
Sample A Female 8.6
Sample B Female 4.3
Sample C Male 9.3
Sample D Male 6.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 20.0
Min nTPM: 18.4
Sample A Male 18.6
Sample B Male 19.3
Sample C Female 18.4
Sample D Female 20.0
Hippocampal formation
nTPM: 20.4
Samples: 4

Max nTPM: 21.8
Min nTPM: 19.2
Sample A Male 19.2
Sample B Male 21.4
Sample C Female 19.2
Sample D Female 21.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
1517 Antisense, RP_040420_01_C07, Mouse strain C57BL/6J (56 days, male) 2.9
1516 Antisense, RP_040420_01_C07, Mouse strain C57BL/6J (56 days, male) 0.7

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