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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.2
nTPM
Monaco:
451.2
nTPM
Schmiedel:
116.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.2
HPA sample
nTPM
gdT-cell nTPM: 96.2
Samples: 6
Max nTPM: 144.0
Min nTPM: 63.8
P10809_1007
144.0
P10809_1022
109.4
P10809_1041
116.1
P10809_1060
65.0
P10809_1077
63.8
P10809_1098
78.6
MAIT T-cell nTPM: 51.3
Samples: 6
Max nTPM: 90.7
Min nTPM: 36.7
P10809_1006
90.7
P10809_1024
36.7
P10809_1043
41.7
P10809_1062
45.4
P10809_1083
37.7
P10809_1097
55.7
Memory CD4 T-cell nTPM: 38.4
Samples: 6
Max nTPM: 53.0
Min nTPM: 28.8
P10809_1014
53.0
P10809_1026
38.1
P10809_1045
30.1
P10809_1064
40.7
P10809_1086
39.7
P10809_1113
28.8
Memory CD8 T-cell nTPM: 65.2
Samples: 5
Max nTPM: 96.7
Min nTPM: 40.2
P10809_1012
96.7
P10809_1027
61.0
P10809_1046
61.6
P10809_1065
66.3
P10809_1111
40.2
Naive CD4 T-cell nTPM: 26.2
Samples: 6
Max nTPM: 46.1
Min nTPM: 13.8
P10809_1015
46.1
P10809_1030
14.1
P10809_1049
13.8
P10809_1068
23.9
P10809_1085
37.2
P10809_1112
21.9
Naive CD8 T-cell nTPM: 47.6
Samples: 6
Max nTPM: 61.6
Min nTPM: 26.8
P10809_1016
59.7
P10809_1031
41.0
P10809_1050
43.9
P10809_1069
52.3
P10809_1087
61.6
P10809_1110
26.8
T-reg nTPM: 34.7
Samples: 6
Max nTPM: 70.2
Min nTPM: 16.3
P10809_1018
70.2
P10809_1037
18.5
P10809_1056
20.5
P10809_1075
44.4
P10809_1094
16.3
P10809_1106
38.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
451.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 186.8
Samples: 4
Max nTPM: 207.4
Min nTPM: 147.7
RHH5202_R3573
186.0
RHH5230_R3602
207.4
RHH5259_R3631
147.7
RHH5288_R3660
205.9
Effector memory CD8 T-cell nTPM: 276.9
Samples: 4
Max nTPM: 333.9
Min nTPM: 227.1
RHH5203_R3574
311.1
RHH5231_R3603
333.9
RHH5260_R3632
235.3
RHH5289_R3661
227.1
MAIT T-cell nTPM: 278.6
Samples: 4
Max nTPM: 326.6
Min nTPM: 251.3
RHH5233_R3605
281.0
RHH5205_R3576
326.6
RHH5262_R3634
251.3
RHH5297_R3663
255.3
Memory CD4 T-cell TFH nTPM: 139.1
Samples: 4
Max nTPM: 200.4
Min nTPM: 84.1
RHH5300_R3666
200.4
RHH5236_R3608
84.1
RHH5265_R3637
184.2
RHH5208_R3579
87.6
Memory CD4 T-cell Th1 nTPM: 180.2
Samples: 4
Max nTPM: 205.4
Min nTPM: 129.9
RHH5210_R3581
195.6
RHH5302_R3668
205.4
RHH5238_R3610
129.9
RHH5267_R3639
189.7
Memory CD4 T-cell Th1/Th17 nTPM: 148.6
Samples: 4
Max nTPM: 212.3
Min nTPM: 110.4
RHH5303_R3669
110.4
RHH5211_R3582
212.3
RHH5239_R3611
124.6
RHH5268_R3640
147.2
Memory CD4 T-cell Th17 nTPM: 206.7
Samples: 4
Max nTPM: 220.7
Min nTPM: 170.3
RHH5304_R3670
216.9
RHH5212_R3583
218.8
RHH5240_R3612
170.3
RHH5269_R3641
220.7
Memory CD4 T-cell Th2 nTPM: 209.3
Samples: 4
Max nTPM: 231.2
Min nTPM: 191.4
RHH5305_R3671
213.2
RHH5213_R3584
201.2
RHH5241_R3613
191.4
RHH5270_R3642
231.2
Naive CD4 T-cell nTPM: 129.5
Samples: 4
Max nTPM: 150.8
Min nTPM: 77.4
RHH5306_R3672
148.3
RHH5214_R3585
77.4
RHH5242_R3614
150.8
RHH5271_R3643
141.6
Naive CD8 T-cell nTPM: 81.7
Samples: 4
Max nTPM: 129.5
Min nTPM: 30.2
RHH5201_R3572
30.2
RHH5229_R3601
46.4
RHH5258_R3630
129.5
RHH5287_R3659
120.8
Non-Vd2 gdTCR nTPM: 448.3
Samples: 4
Max nTPM: 548.4
Min nTPM: 328.7
RHH5235_R3607
435.2
RHH5264_R3636
328.7
RHH5207_R3578
481.0
RHH5299_R3665
548.4
T-reg nTPM: 132.8
Samples: 4
Max nTPM: 179.9
Min nTPM: 86.8
RHH5301_R3667
179.9
RHH5237_R3609
86.8
RHH5266_R3638
148.3
RHH5209_R3580
116.0
Terminal effector memory CD4 T-cell nTPM: 451.2
Samples: 2
Max nTPM: 530.0
Min nTPM: 372.4
RHH5243_R3615
530.0
RHH5272_R3644
372.4
Terminal effector memory CD8 T-cell nTPM: 445.0
Samples: 4
Max nTPM: 516.8
Min nTPM: 399.9
RHH5232_R3604
516.8
RHH5204_R3575
461.7
RHH5261_R3633
399.9
RHH5296_R3662
401.6
Vd2 gdTCR nTPM: 324.8
Samples: 4
Max nTPM: 460.2
Min nTPM: 244.7
RHH5234_R3606
300.8
RHH5206_R3577
460.2
RHH5263_R3635
244.7
RHH5298_R3664
293.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
