We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
52.4
nTPM
Monaco:
272.4
nTPM
Schmiedel:
270.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
52.4
HPA sample
nTPM
gdT-cell nTPM: 6.6
Samples: 6
Max nTPM: 11.0
Min nTPM: 3.9
P10809_1007
3.9
P10809_1022
6.4
P10809_1041
7.7
P10809_1060
6.4
P10809_1077
4.1
P10809_1098
11.0
MAIT T-cell nTPM: 52.4
Samples: 6
Max nTPM: 60.6
Min nTPM: 38.5
P10809_1006
60.6
P10809_1024
56.2
P10809_1043
40.5
P10809_1062
60.5
P10809_1083
38.5
P10809_1097
58.1
Memory CD4 T-cell nTPM: 16.3
Samples: 6
Max nTPM: 24.1
Min nTPM: 7.2
P10809_1014
24.1
P10809_1026
16.2
P10809_1045
14.2
P10809_1064
7.2
P10809_1086
16.0
P10809_1113
20.0
Memory CD8 T-cell nTPM: 10.7
Samples: 5
Max nTPM: 14.4
Min nTPM: 5.6
P10809_1012
11.7
P10809_1027
5.6
P10809_1046
13.4
P10809_1065
8.5
P10809_1111
14.4
Naive CD4 T-cell nTPM: 15.7
Samples: 6
Max nTPM: 22.2
Min nTPM: 8.8
P10809_1015
21.8
P10809_1030
12.1
P10809_1049
11.3
P10809_1068
18.2
P10809_1085
8.8
P10809_1112
22.2
Naive CD8 T-cell nTPM: 6.6
Samples: 6
Max nTPM: 13.4
Min nTPM: 0.8
P10809_1016
11.9
P10809_1031
5.3
P10809_1050
3.6
P10809_1069
4.6
P10809_1087
0.8
P10809_1110
13.4
T-reg nTPM: 2.0
Samples: 6
Max nTPM: 6.5
Min nTPM: 0.0
P10809_1018
1.7
P10809_1037
0.0
P10809_1056
0.2
P10809_1075
3.3
P10809_1094
6.5
P10809_1106
0.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
272.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.3
Samples: 4
Max nTPM: 113.9
Min nTPM: 37.5
RHH5202_R3573
52.9
RHH5230_R3602
113.9
RHH5259_R3631
80.8
RHH5288_R3660
37.5
Effector memory CD8 T-cell nTPM: 23.7
Samples: 4
Max nTPM: 45.2
Min nTPM: 10.4
RHH5203_R3574
45.2
RHH5231_R3603
10.4
RHH5260_R3632
17.7
RHH5289_R3661
21.3
MAIT T-cell nTPM: 272.4
Samples: 4
Max nTPM: 348.3
Min nTPM: 168.9
RHH5233_R3605
303.8
RHH5205_R3576
348.3
RHH5262_R3634
268.6
RHH5297_R3663
168.9
Memory CD4 T-cell TFH nTPM: 49.1
Samples: 4
Max nTPM: 60.0
Min nTPM: 38.7
RHH5300_R3666
38.7
RHH5236_R3608
50.3
RHH5265_R3637
47.5
RHH5208_R3579
60.0
Memory CD4 T-cell Th1 nTPM: 81.9
Samples: 4
Max nTPM: 114.5
Min nTPM: 45.1
RHH5210_R3581
73.8
RHH5302_R3668
45.1
RHH5238_R3610
114.5
RHH5267_R3639
94.3
Memory CD4 T-cell Th1/Th17 nTPM: 191.5
Samples: 4
Max nTPM: 249.3
Min nTPM: 155.8
RHH5303_R3669
155.8
RHH5211_R3582
204.5
RHH5239_R3611
249.3
RHH5268_R3640
156.3
Memory CD4 T-cell Th17 nTPM: 135.8
Samples: 4
Max nTPM: 142.9
Min nTPM: 120.6
RHH5304_R3670
142.9
RHH5212_R3583
142.6
RHH5240_R3612
137.2
RHH5269_R3641
120.6
Memory CD4 T-cell Th2 nTPM: 62.0
Samples: 4
Max nTPM: 76.9
Min nTPM: 40.6
RHH5305_R3671
40.6
RHH5213_R3584
76.9
RHH5241_R3613
76.7
RHH5270_R3642
53.9
Naive CD4 T-cell nTPM: 74.2
Samples: 4
Max nTPM: 84.6
Min nTPM: 63.6
RHH5306_R3672
75.0
RHH5214_R3585
73.4
RHH5242_R3614
84.6
RHH5271_R3643
63.6
Naive CD8 T-cell nTPM: 55.2
Samples: 4
Max nTPM: 60.0
Min nTPM: 46.8
RHH5201_R3572
46.8
RHH5229_R3601
56.6
RHH5258_R3630
57.3
RHH5287_R3659
60.0
Non-Vd2 gdTCR nTPM: 13.7
Samples: 4
Max nTPM: 43.1
Min nTPM: 1.8
RHH5235_R3607
43.1
RHH5264_R3636
6.4
RHH5207_R3578
3.6
RHH5299_R3665
1.8
T-reg nTPM: 48.8
Samples: 4
Max nTPM: 65.9
Min nTPM: 36.8
RHH5301_R3667
36.8
RHH5237_R3609
38.4
RHH5266_R3638
65.9
RHH5209_R3580
54.2
Terminal effector memory CD4 T-cell nTPM: 8.8
Samples: 2
Max nTPM: 13.6
Min nTPM: 4.0
RHH5243_R3615
4.0
RHH5272_R3644
13.6
Terminal effector memory CD8 T-cell nTPM: 2.4
Samples: 4
Max nTPM: 6.1
Min nTPM: 0.4
RHH5232_R3604
6.1
RHH5204_R3575
0.4
RHH5261_R3633
2.5
RHH5296_R3662
0.6
Vd2 gdTCR nTPM: 87.2
Samples: 4
Max nTPM: 136.2
Min nTPM: 33.0
RHH5234_R3606
136.2
RHH5206_R3577
33.0
RHH5263_R3635
113.3
RHH5298_R3664
66.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
