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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
59.8
nTPM
HPA Brain:
358.8
nTPM
GTEx:
59.8
nTPM
FANTOM5:
265.7
Scaled Tags Per Million
Pig:
241.5
nTPM
Mouse:
163.5
nTPM
Allen mouse:
16.4
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
358.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 283.6
2019
Male, age 18, unknown
360.4
2219
Male, age 76, both hemispheres
329.9
2828
Female, age 72, unknown
320.2
1827
Male, age 72, unknown
315.1
2666
Male, age 74, left hemisphere
283.4
2586
Male, age 75, left hemisphere
279.5
2411
Female, age 72, unknown
270.3
1833
Male, age 53, unknown
233.5
1830
Male, age 51, unknown
222.7
1870
Female, age 42, unknown
221.4
Dorsal raphe nucleus nTPM: 310.1
2298
Female, age 72, unknown
363.0
2047
Male, age 72, unknown
342.1
1828
Male, age 53, unknown
335.9
2016
Female, age 72, unknown
281.8
2750
Male, age 76, both hemispheres
227.6
Inferior colliculus nTPM: 298.5
2097
Female, age 72, unknown
325.9
1848
Female, age 42, unknown
308.3
2849
Male, age 72, unknown
283.1
1890
Male, age 53, unknown
276.7
Median raphe nucleus nTPM: 265.4
2220
Male, age 76, midline
265.4
Periaquaductal grey, anterior nTPM: 331.2
1795
Male, age 51, unknown
345.8
2502
Female, age 75, unknown
328.8
1947
Male, age 18, unknown
319.1
Periaquaductal grey, dorsal nTPM: 276.1
1840
Male, age 53, unknown
303.4
1831
Male, age 72, unknown
279.1
2464
Female, age 72, unknown
269.1
2850
Male, age 76, both hemispheres
252.9
Periaquaductal grey, lateral nTPM: 280.6
2272
Male, age 74, both hemispheres
307.9
2140
Male, age 76, both hemispheres
280.2
2053
Male, age 18, unknown
253.8
Pretectal area nTPM: 338.1
1816
Male, age 51, unknown
412.7
1944
Female, age 72, unknown
402.0
2007
Male, age 72, unknown
387.8
2273
Male, age 74, both hemispheres
384.7
1817
Female, age 42, unknown
362.5
2667
Female, age 75, unknown
323.0
2224
Female, age 72, unknown
322.7
1815
Male, age 53, unknown
304.5
2407
Male, age 75, both hemispheres
297.5
2316
Male, age 76, right hemisphere
267.2
2825
Male, age 18, unknown
254.3
Red nucleus nTPM: 251.4
2785
Male, age 18, unknown
328.4
2725
Female, age 75, unknown
292.4
2503
Female, age 72, unknown
264.5
1821
Female, age 72, unknown
260.3
2584
Male, age 75, left hemisphere
256.9
2769
Male, age 72, unknown
242.6
1865
Male, age 51, unknown
241.2
2227
Male, age 72, unknown
241.0
1954
Female, age 42, unknown
238.5
2588
Male, age 74, left hemisphere
235.8
1904
Male, age 53, unknown
214.3
2823
Male, age 76, right hemisphere
200.4
Substantia nigra nTPM: 358.8
1941
Male, age 53, unknown
511.0
1916
Female, age 42, unknown
495.7
1851
Male, age 51, unknown
380.2
2665
Male, age 74, both hemispheres
345.9
1889
Female, age 72, unknown
335.0
2590
Female, age 75, unknown
330.6
2241
Male, age 72, unknown
324.9
2699
Male, age 18, unknown
299.4
2583
Male, age 75, right hemisphere
295.5
2409
Female, age 72, unknown
270.2
Superior colliculus nTPM: 299.9
2087
Female, age 72, unknown
359.1
2664
Male, age 75, both hemispheres
356.6
1796
Male, age 53, unknown
318.7
2587
Male, age 74, left hemisphere
313.6
2261
Male, age 18, unknown
308.8
1895
Male, age 76, right hemisphere
308.2
2668
Female, age 75, unknown
280.5
1839
Male, age 51, unknown
273.5
1995
Male, age 72, unknown
242.8
1913
Female, age 42, unknown
237.0
Ventral tegmental area nTPM: 314.7
1915
Female, age 42, unknown
367.8
2410
Female, age 72, unknown
334.1
2218
Male, age 76, both hemispheres
327.6
1942
Male, age 51, unknown
316.2
2021
Male, age 53, unknown
273.2
2223
Female, age 72, unknown
269.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
59.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 59.8
Samples: 139
Max nTPM: 279.4
Min nTPM: 23.1
Std nTPM: 30.4
Median nTPM: 52.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
279.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
196.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
132.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
127.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
119.0
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
114.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
113.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
109.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
100.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
99.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
98.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
96.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
93.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
91.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
89.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
88.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
88.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
86.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
84.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
80.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
79.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
78.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
77.5
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
75.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
74.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
74.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
74.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
74.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
73.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
71.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
71.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
66.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
65.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
64.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
64.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
64.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
63.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
63.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
62.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
62.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
62.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
61.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
61.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
61.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
60.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
60.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
60.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
59.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
59.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
59.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
58.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
58.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
57.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
57.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
57.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
57.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
57.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
56.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
55.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
54.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
54.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
54.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
54.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
54.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
53.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
53.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
53.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
53.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
53.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
52.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
52.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
51.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
51.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
51.7
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
51.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
51.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
50.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
50.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
49.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
49.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
49.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
49.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
49.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
49.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
49.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
47.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
47.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
47.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
47.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
46.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
46.2
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
46.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
45.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
45.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
45.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
45.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
45.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
44.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
44.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
44.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
44.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
44.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
43.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
43.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
43.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
43.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
43.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
43.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
42.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
42.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
42.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
42.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
41.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
40.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
40.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
40.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
40.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
39.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
39.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
39.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
39.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
38.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
38.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
37.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
36.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
34.8
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
34.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
34.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
34.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
34.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
33.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
31.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
31.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
31.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
30.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
30.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
28.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
26.8
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
23.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
163.5
Mouse sample
Sample description
nTPM
Midbrain nTPM: 163.5
Samples: 4
Max nTPM: 184.5
Min nTPM: 134.0
Sample A
Male
134.0
Sample B
Male
170.1
Sample C
Female
184.5
Sample D
Female
165.2
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.