HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:62.2 nTPM
HPA Brain:398.6 nTPM
GTEx:62.2 nTPM
FANTOM5:594.4 Scaled Tags Per Million
Pig:307.4 nTPM
Mouse:279.8 nTPM
Allen mouse:20.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007927Antibody CAB004581
Glial cells MediumLow
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 398.6
Sample id Sample description nTPM
Hippocampus
nTPM: 330.4
1898 Male, age 80, left hemisphere 371.7
2148 Female, age 91, left hemisphere 369.4
2529 Female, age 94, left hemisphere 353.4
2621 Female, age 67, right hemisphere 325.2
1911 Female, age 85, right hemisphere 283.3
1855 Male, age 76, left hemisphere 279.6
Dentate gyrus
nTPM: 331.2
2528 Male, age 74, both hemispheres 403.7
1927 Female, age 91, both hemispheres 380.8
2531 Female, age 67, both hemispheres 327.2
2530 Female, age 94, left hemisphere 306.3
2010 Male, age 76, both hemispheres 290.5
2246 Female, age 85, both hemispheres 278.5
Entorhinal gyrus
nTPM: 340.4
2764 Male, age 80, right hemisphere 383.2
2686 Male, age 75, right hemisphere 350.8
2613 Female, age 94, left hemisphere 344.8
1938 Female, age 85, left hemisphere 336.0
1787 Male, age 76, left hemisphere 325.1
2117 Female, age 91, right hemisphere 302.4
Hippocampus, CA1
nTPM: 355.1
2749 Male, age 80, left hemisphere 428.2
2527 Male, age 74, both hemispheres 387.4
2082 Female, age 91, right hemisphere 335.4
1873 Female, age 85, both hemispheres 329.6
2045 Male, age 76, both hemispheres 294.9
Hippocampus, CA2
nTPM: 334.9
1963 Male, age 80, left hemisphere 370.2
2249 Male, age 74, both hemispheres 366.9
1892 Male, age 76, both hemispheres 351.3
2113 Female, age 91, right hemisphere 341.6
2437 Female, age 94, left hemisphere 303.2
1940 Female, age 85, left hemisphere 276.1
Hippocampus, CA3
nTPM: 329.7
2620 Female, age 94, left hemisphere 404.0
2137 Male, age 80, left hemisphere 378.1
2861 Female, age 67, both hemispheres 343.0
2436 Male, age 74, both hemispheres 300.7
1867 Male, age 76, both hemispheres 294.3
1891 Female, age 85, both hemispheres 258.3
Parahippocampal cortex
nTPM: 328.5
1850 Male, age 80, both hemispheres 391.0
2245 Female, age 91, both hemispheres 387.6
1990 Female, age 91, right hemisphere 350.3
2250 Female, age 67, right hemisphere 329.2
2693 Female, age 94, both hemispheres 322.8
1933 Female, age 85, both hemispheres 316.0
2622 Female, age 67, right hemisphere 315.0
2692 Male, age 74, both hemispheres 293.1
2532 Female, age 72, left hemisphere 292.9
2018 Male, age 76, both hemispheres 286.6
Perirhinal gyrus
nTPM: 398.6
1847 Female, age 91, left hemisphere 458.4
1794 Male, age 80, right hemisphere 449.3
2848 Male, age 76, right hemisphere 381.0
1841 Female, age 85, right hemisphere 374.8
2521 Female, age 94, right hemisphere 329.7
Subiculum
nTPM: 296.8
2729 Female, age 91, right hemisphere 343.3
2619 Male, age 74, both hemispheres 321.3
1977 Female, age 85, both hemispheres 306.2
2438 Female, age 94, left hemisphere 298.5
1901 Male, age 80, both hemispheres 278.0
2042 Male, age 76, both hemispheres 233.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.2
Samples: 197

Max nTPM: 142.2
Min nTPM: 21.8
Std nTPM: 22.5
Median nTPM: 58.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 142.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 134.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 127.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 122.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 120.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 120.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 116.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 112.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 110.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 110.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 108.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 594.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 594.4
FF:10169-103B7 60 years, female 707.2
FF:10153-102I9 76 years, female 481.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 307.4
Pig sample Sample description nTPM
Subiculum
nTPM: 277.5
Samples: 4

Max nTPM: 369.6
Min nTPM: 216.9
Sample A Female 369.6
Sample B Female 249.6
Sample C Male 273.9
Sample D Male 216.9
Dorsal hippocampus
nTPM: 275.2
Samples: 4

Max nTPM: 336.9
Min nTPM: 218.3
Sample A Female 336.9
Sample B Female 301.5
Sample C Male 244.2
Sample D Male 218.3
Entorhinal cortex
nTPM: 307.4
Samples: 4

Max nTPM: 336.7
Min nTPM: 288.1
Sample A Female 336.7
Sample B Female 292.5
Sample C Male 312.3
Sample D Male 288.1
Ventral hippocampus
nTPM: 281.5
Samples: 4

Max nTPM: 335.6
Min nTPM: 207.5
Sample A Female 247.7
Sample B Female 207.5
Sample C Male 335.0
Sample D Male 335.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 279.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 279.8
Samples: 4

Max nTPM: 345.9
Min nTPM: 252.4
Sample A Male 266.5
Sample B Male 254.3
Sample C Female 252.4
Sample D Female 345.9
Hippocampal formation
nTPM: 247.6
Samples: 4

Max nTPM: 289.4
Min nTPM: 205.3
Sample A Male 205.3
Sample B Male 280.9
Sample C Female 289.4
Sample D Female 214.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.7
70596059 Antisense, RP_050628_04_A03, Mouse strain C57BL/6J (56 days, male) 23.6
69885690 Antisense, RP_050512_03_C04, Mouse strain C57BL/6J (56 days, male) 17.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org