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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
964.7
nTPM
Monaco:
30.5
nTPM
Schmiedel:
316.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
964.7
HPA sample
nTPM
gdT-cell nTPM: 650.5
Samples: 6
Max nTPM: 899.5
Min nTPM: 206.6
P10809_1007
899.5
P10809_1022
658.2
P10809_1041
720.4
P10809_1060
206.6
P10809_1077
796.8
P10809_1098
621.4
MAIT T-cell nTPM: 723.5
Samples: 6
Max nTPM: 883.2
Min nTPM: 277.0
P10809_1006
749.3
P10809_1024
851.0
P10809_1043
730.9
P10809_1062
277.0
P10809_1083
883.2
P10809_1097
849.8
Memory CD4 T-cell nTPM: 842.9
Samples: 6
Max nTPM: 1138.9
Min nTPM: 311.1
P10809_1014
1138.9
P10809_1026
1101.4
P10809_1045
811.4
P10809_1064
311.1
P10809_1086
933.9
P10809_1113
760.4
Memory CD8 T-cell nTPM: 711.1
Samples: 5
Max nTPM: 936.2
Min nTPM: 288.8
P10809_1012
871.6
P10809_1027
936.2
P10809_1046
734.6
P10809_1065
288.8
P10809_1111
724.3
Naive CD4 T-cell nTPM: 900.0
Samples: 6
Max nTPM: 1420.2
Min nTPM: 225.4
P10809_1015
1420.2
P10809_1030
1174.4
P10809_1049
817.9
P10809_1068
225.4
P10809_1085
951.2
P10809_1112
811.1
Naive CD8 T-cell nTPM: 865.5
Samples: 6
Max nTPM: 1599.7
Min nTPM: 269.6
P10809_1016
1599.7
P10809_1031
1007.8
P10809_1050
751.5
P10809_1069
269.6
P10809_1087
846.9
P10809_1110
717.7
T-reg nTPM: 964.7
Samples: 6
Max nTPM: 1226.0
Min nTPM: 426.5
P10809_1018
1226.0
P10809_1037
1151.5
P10809_1056
1085.5
P10809_1075
426.5
P10809_1094
978.8
P10809_1106
920.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 14.2
Samples: 4
Max nTPM: 33.4
Min nTPM: 5.5
RHH5202_R3573
5.5
RHH5230_R3602
9.5
RHH5259_R3631
33.4
RHH5288_R3660
8.5
Effector memory CD8 T-cell nTPM: 13.8
Samples: 4
Max nTPM: 19.5
Min nTPM: 9.9
RHH5203_R3574
10.2
RHH5231_R3603
9.9
RHH5260_R3632
19.5
RHH5289_R3661
15.6
MAIT T-cell nTPM: 13.3
Samples: 4
Max nTPM: 24.4
Min nTPM: 8.1
RHH5233_R3605
9.0
RHH5205_R3576
24.4
RHH5262_R3634
8.1
RHH5297_R3663
11.8
Memory CD4 T-cell TFH nTPM: 12.3
Samples: 4
Max nTPM: 16.6
Min nTPM: 4.6
RHH5300_R3666
15.5
RHH5236_R3608
12.3
RHH5265_R3637
16.6
RHH5208_R3579
4.6
Memory CD4 T-cell Th1 nTPM: 30.5
Samples: 4
Max nTPM: 62.7
Min nTPM: 12.5
RHH5210_R3581
12.5
RHH5302_R3668
21.1
RHH5238_R3610
62.7
RHH5267_R3639
25.8
Memory CD4 T-cell Th1/Th17 nTPM: 21.5
Samples: 4
Max nTPM: 32.0
Min nTPM: 10.4
RHH5303_R3669
10.4
RHH5211_R3582
12.9
RHH5239_R3611
32.0
RHH5268_R3640
30.5
Memory CD4 T-cell Th17 nTPM: 24.1
Samples: 4
Max nTPM: 29.4
Min nTPM: 18.7
RHH5304_R3670
28.7
RHH5212_R3583
18.7
RHH5240_R3612
29.4
RHH5269_R3641
19.7
Memory CD4 T-cell Th2 nTPM: 17.9
Samples: 4
Max nTPM: 33.1
Min nTPM: 10.3
RHH5305_R3671
33.1
RHH5213_R3584
12.4
RHH5241_R3613
10.3
RHH5270_R3642
15.7
Naive CD4 T-cell nTPM: 14.6
Samples: 4
Max nTPM: 22.6
Min nTPM: 7.0
RHH5306_R3672
22.6
RHH5214_R3585
7.0
RHH5242_R3614
15.0
RHH5271_R3643
13.8
Naive CD8 T-cell nTPM: 17.6
Samples: 4
Max nTPM: 24.1
Min nTPM: 7.5
RHH5201_R3572
17.5
RHH5229_R3601
24.1
RHH5258_R3630
7.5
RHH5287_R3659
21.1
Non-Vd2 gdTCR nTPM: 14.9
Samples: 4
Max nTPM: 22.0
Min nTPM: 6.3
RHH5235_R3607
19.2
RHH5264_R3636
6.3
RHH5207_R3578
22.0
RHH5299_R3665
12.2
T-reg nTPM: 18.9
Samples: 4
Max nTPM: 20.8
Min nTPM: 15.0
RHH5301_R3667
19.2
RHH5237_R3609
15.0
RHH5266_R3638
20.8
RHH5209_R3580
20.7
Terminal effector memory CD4 T-cell nTPM: 10.7
Samples: 2
Max nTPM: 12.5
Min nTPM: 8.9
RHH5243_R3615
12.5
RHH5272_R3644
8.9
Terminal effector memory CD8 T-cell nTPM: 17.6
Samples: 4
Max nTPM: 28.9
Min nTPM: 7.7
RHH5232_R3604
7.7
RHH5204_R3575
28.9
RHH5261_R3633
23.4
RHH5296_R3662
10.2
Vd2 gdTCR nTPM: 26.1
Samples: 4
Max nTPM: 63.1
Min nTPM: 9.4
RHH5234_R3606
9.4
RHH5206_R3577
63.1
RHH5263_R3635
19.4
RHH5298_R3664
12.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
